Experiment set10IT018 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Aristolochic Acid 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -5.1 -5.2 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1544 -4.6 -6.3 SirA-like protein compare
Psyr_4740 -3.9 -8.5 thiazole-phosphate synthase compare
Psyr_4340 -3.6 -9.9 phosphomethylpyrimidine kinase, putative compare
Psyr_4686 -3.3 -6.9 8-amino-7-oxononanoate synthase compare
Psyr_0917 -3.2 -10.8 ABC-2 compare
Psyr_0259 -3.2 -3.1 Osmolarity sensor protein envZ compare
Psyr_4341 -3.2 -6.4 thiamine-phosphate diphosphorylase compare
Psyr_0454 -3.1 -5.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1613 -2.9 -2.8 septum site-determining protein MinC compare
Psyr_4687 -2.9 -6.9 biotin synthase compare
Psyr_4627 -2.7 -1.8 dimethyladenosine transferase compare
Psyr_0918 -2.7 -13.5 ABC transporter compare
Psyr_3008 -2.7 -6.1 Undecaprenyl-diphosphatase compare
Psyr_3419 -2.6 -7.4 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_4203 -2.5 -1.7 SsrA-binding protein compare
Psyr_0575 -2.4 -3.6 protease FtsH subunit HflC compare
Psyr_0574 -2.4 -3.3 protease FtsH subunit HflK compare
Psyr_1751 -2.4 -4.1 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4683 -2.3 -4.4 dethiobiotin synthase compare
Psyr_0383 -2.3 -2.8 Twin-arginine translocation protein TatB compare
Psyr_2347 -2.3 -3.4 hypothetical protein compare
Psyr_0487 -2.3 -3.3 glutathione synthase compare
Psyr_4978 -2.2 -3.8 hypothetical protein compare
Psyr_1247 -2.2 -3.8 conserved hypothetical protein compare
Psyr_1907 -2.1 -3.1 GTP cyclohydrolase I compare
Psyr_0849 -2.1 -7.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3620 -2.1 -2.7 hypothetical protein compare
Psyr_3287 -2.0 -1.4 DNA topoisomerase I compare
Psyr_1935 -2.0 -4.1 Protein of unknown function DUF796 compare
Psyr_4684 -2.0 -3.0 biotin synthesis protein BioC compare
Psyr_4091 -2.0 -3.5 8-oxo-dGTPase compare
Psyr_5133 -1.9 -4.8 tRNA modification GTPase trmE compare
Psyr_2620 -1.8 -2.2 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_0571 -1.8 -4.9 tRNA isopentenyltransferase compare
Psyr_4362 -1.8 -3.3 Rare lipoprotein A compare
Psyr_2345 -1.7 -3.9 ea59 protein compare
Psyr_0565 -1.7 -7.0 Protein of unknown function UPF0126 compare
Psyr_3808 -1.7 -1.0 hypothetical protein compare
Psyr_4089 -1.7 -5.9 PAS compare
Psyr_2860 -1.7 -1.9 hypothetical protein compare
Psyr_3462 -1.6 -2.1 conserved hypothetical protein compare
Psyr_2462 -1.6 -4.1 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_2897 -1.6 -4.5 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0857 -1.6 -2.9 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_4566 -1.5 -6.2 Peptidase M23B compare
Psyr_3213 -1.5 -2.4 Propeptide, PepSY amd peptidase M4 compare
Psyr_3581 -1.5 -5.3 ribosomal large subunit pseudouridine synthase B compare
Psyr_0215 -1.5 -7.2 Exodeoxyribonuclease III xth compare
Psyr_2184 -1.5 -1.9 Short-chain dehydrogenase/reductase SDR compare
Psyr_4884 -1.5 -4.5 Rhodanese-like protein compare
Psyr_3806 -1.5 -3.2 hypothetical protein compare
Psyr_4194 -1.5 -3.9 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0033 -1.5 -1.9 tryptophan synthase, alpha chain compare
Psyr_1198 -1.4 -3.2 type III secretion protein HrpF compare
Psyr_1931 -1.4 -3.9 hypothetical protein compare
Psyr_3104 -1.4 -2.4 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_2312 -1.4 -1.1 Protein of unknown function DUF24 compare
Psyr_3954 -1.4 -3.7 GTP-binding protein LepA compare
Psyr_0920 -1.4 -10.5 Glycosyl transferase, group 1 compare
Psyr_2854 -1.4 -5.0 conserved hypothetical protein compare
Psyr_3473 -1.3 -1.8 Flagellar P-ring protein compare
Psyr_3088 -1.3 -2.8 Glycosyl transferase, group 1 compare
Psyr_0919 -1.3 -7.3 Chromosome segregation ATPase-like protein compare
Psyr_3290 -1.3 -2.7 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_3164 -1.3 -6.8 Protein of unknown function UPF0005 compare
Psyr_2084 -1.3 -2.6 transcriptional regulator, GntR family compare
Psyr_0475 -1.3 -0.9 Protein of unknown function YGGT compare
Psyr_RNA61 -1.3 -2.5 tRNA-Gly compare
Psyr_1747 -1.3 -3.6 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3673 -1.3 -1.6 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_2348 -1.2 -2.0 hypothetical protein compare
Psyr_0826 -1.2 -5.6 glucose-6-phosphate isomerase compare
Psyr_0034 -1.2 -0.8 tryptophan synthase, beta chain compare
Psyr_1227 -1.2 -2.9 Queuosine biosynthesis protein compare
Psyr_1418 -1.2 -2.6 Radical SAM compare
Psyr_2899 -1.2 -3.5 conserved hypothetical protein compare
Psyr_3179 -1.2 -2.3 DNA translocase FtsK compare
Psyr_2855 -1.2 -3.7 methionine synthase (B12-independent) compare
Psyr_3436 -1.2 -3.9 Response regulator receiver compare
Psyr_4262 -1.2 -1.3 lipoprotein, putative compare
Psyr_2642 -1.2 -3.0 hypothetical protein compare
Psyr_3449 -1.2 -3.9 Flagellar hook-length control protein compare
Psyr_0231 -1.2 -2.2 conserved hypothetical protein compare
Psyr_2346 -1.1 -3.5 conserved hypothetical protein compare
Psyr_4991 -1.1 -1.8 hypothetical protein compare
Psyr_2977 -1.1 -2.6 cointegrate resolution protein T compare
Psyr_2851 -1.1 -1.7 conserved hypothetical protein compare
Psyr_1459 -1.1 -3.0 DNA polymerase, beta-like region compare
Psyr_1555 -1.1 -2.8 Cobyrinic acid a,c-diamide synthase compare
Psyr_2824 -1.1 -2.9 conserved hypothetical protein compare
Psyr_3202 -1.1 -2.4 NADH dehydrogenase subunit G compare
Psyr_2982 -1.1 -3.0 conserved hypothetical protein compare
Psyr_5132 -1.1 -2.4 Glucose-inhibited division protein A subfamily compare
Psyr_2320 -1.1 -3.9 YD repeat protein compare
Psyr_1350 -1.1 -2.5 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_4480 -1.1 -2.0 outer membrane transport energization protein TonB compare
Psyr_0044 -1.1 -1.2 transferase hexapeptide repeat protein compare
Psyr_3547 -1.1 -3.2 transcriptional regulator, TetR family compare
Psyr_2601 -1.1 -4.2 regulatory protein, LuxR compare
Psyr_4118 -1.1 -4.3 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_5135 -1.0 -1.1 Protein of unknown function DUF37 compare
Psyr_2471 -1.0 -1.7 hydroxymethylglutaryl-CoA lyase compare
Psyr_1460 -1.0 -2.8 hypothetical protein compare
Psyr_0735 -1.0 -2.1 Peptidase S24, S26A and S26B compare
Psyr_3637 -1.0 -6.6 Glycosyl transferase, family 4 compare
Psyr_1885 -1.0 -1.5 hypothetical protein compare
Psyr_2383 -1.0 -1.3 Protein of unknown function DUF72 compare
Psyr_0464 -1.0 -1.7 hypothetical protein compare
Psyr_3807 -1.0 -3.3 hypothetical protein compare
Psyr_4100 -1.0 -3.0 D-alanine--D-alanine ligase compare
Psyr_2141 -1.0 -1.6 hypothetical protein compare
Psyr_2837 -1.0 -5.2 hypothetical protein compare
Psyr_3805 -1.0 -1.6 hypothetical protein compare
Psyr_2980 -1.0 -2.5 UDP-glucose pyrophosphorylase compare
Psyr_1563 -1.0 -4.2 Ribonuclease D compare
Psyr_0535 -0.9 -2.6 toluene tolerance protein, putative compare
Psyr_1911 -0.9 -2.3 conserved hypothetical protein compare
Psyr_0863 -0.9 -2.4 PhnA protein compare
Psyr_4750 -0.9 -2.2 cell division ATP-binding protein FtsE compare
Psyr_4754 -0.9 -2.1 16S rRNA m(2)G-966 methyltransferase compare
Psyr_2209 -0.9 -2.2 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_5096 -0.9 -2.7 hypothetical protein compare
Psyr_2645 -0.9 -3.9 hypothetical protein compare
Psyr_0303 -0.9 -2.3 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_2202 -0.9 -1.8 ABC transporter compare
Psyr_4112 -0.9 -5.1 Protein of unknown function UPF0011 compare
Psyr_1919 -0.9 -3.2 hypothetical protein compare
Psyr_4989 -0.9 -2.7 hypothetical protein compare
Psyr_3867 -0.9 -1.8 hypothetical protein compare
Psyr_1633 -0.9 -1.0 MotA/TolQ/ExbB proton channel compare
Psyr_2065 -0.9 -2.5 transcription elongation factor GreB compare
Psyr_2664 -0.9 -3.3 hypothetical protein compare
Psyr_2285 -0.9 -1.7 Twin-arginine translocation pathway signal compare
Psyr_1702 -0.9 -3.4 regulatory protein, LuxR compare
Psyr_3900 -0.9 -2.2 conserved hypothetical protein compare
Psyr_2948 -0.9 -3.9 Nitroreductase compare
Psyr_0529 -0.8 -3.0 Glycosyl transferase, group 1 compare
Psyr_1226 -0.8 -2.7 hypothetical protein compare
Psyr_4317 -0.8 -2.8 Probable taurine catabolism dioxygenase-like protein compare
Psyr_2535 -0.8 -2.6 GGDEF domain protein compare
Psyr_2564 -0.8 -2.0 transcriptional regulator, GntR family compare
Psyr_3640 -0.8 -1.1 conserved hypothetical protein compare
Psyr_2381 -0.8 -2.7 Allergen V5/Tpx-1 related protein compare
Psyr_4476 -0.8 -4.1 dTDP-4-dehydrorhamnose reductase compare
Psyr_2770 -0.8 -3.8 tail fiber domain protein compare
Psyr_4003 -0.8 -2.1 conserved hypothetical protein compare
Psyr_4117 -0.8 -4.1 Stringent starvation protein B compare
Psyr_0941 -0.8 -4.2 Conserved hypothetical protein 92 compare
Psyr_2321 -0.8 -3.7 YD repeat protein compare
Psyr_3685 -0.8 -2.8 Silent information regulator protein Sir2 compare
Psyr_2375 -0.8 -2.3 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4015 -0.8 -1.6 conserved domain protein compare
Psyr_0979 -0.8 -2.2 conserved hypothetical protein compare
Psyr_3490 -0.8 -3.0 conserved hypothetical protein compare
Psyr_0936 -0.8 -5.5 Glycosyl transferase, group 1 compare
Psyr_2264 -0.8 -1.3 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_4996 -0.8 -3.2 hypothetical protein compare
Psyr_0099 -0.8 -1.7 Conserved hypothetical protein compare
Psyr_1405 -0.8 -2.1 hypothetical protein compare
Psyr_2356 -0.8 -2.1 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_3702 -0.8 -1.2 Arsenate reductase compare
Psyr_2657 -0.8 -4.0 hypothetical protein compare
Psyr_3418 -0.8 -3.0 PilT protein, N-terminal compare
Psyr_2875 -0.8 -2.1 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_2629 -0.8 -3.8 von Willebrand factor, type A compare
Psyr_0835 -0.8 -3.1 transcriptional regulator, TraR/DksA family compare
Psyr_3084 -0.8 -1.2 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2639 -0.8 -2.9 hypothetical protein compare
Psyr_1937 -0.8 -1.4 UspA compare
Psyr_0447 -0.8 -2.5 malonate decarboxylase subunit, putative compare
Psyr_2930 -0.8 -1.7 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_2848 -0.7 -1.8 hypothetical protein compare
Psyr_3522 -0.7 -3.2 L-serine ammonia-lyase compare
Psyr_2660 -0.7 -4.1 hypothetical protein compare
Psyr_1474 -0.7 -3.5 hypothetical protein compare
Psyr_3089 -0.7 -5.7 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein compare
Psyr_2192 -0.7 -2.6 transcriptional regulator, TetR family compare
Psyr_2143 -0.7 -0.8 delta1-piperideine 2-carboxylate reductase compare
Psyr_2433 -0.7 -1.9 conserved hypothetical protein compare
Psyr_1748 -0.7 -2.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_4995 -0.7 -1.6 RHS protein compare
Psyr_2496 -0.7 -3.3 lipopolysaccharide core biosynthesis domain protein compare
Psyr_3952 -0.7 -1.6 conserved hypothetical protein compare
Psyr_1419 -0.7 -1.8 preQ(0) biosynthesis protein QueC compare
Psyr_2619 -0.7 -2.6 diaminobutyrate aminotransferase apoenzyme compare
Psyr_3458 -0.7 -1.1 Flagellar hook-basal body complex protein FliE compare
Psyr_0927 -0.7 -1.3 hypothetical protein compare
Psyr_0037 -0.7 -2.4 Protein of unknown function DUF1458 compare
Psyr_0053 -0.7 -2.0 conserved hypothetical protein compare
Psyr_3866 -0.7 -2.8 conserved hypothetical protein compare
Psyr_4144 -0.7 -1.1 Protein of unknown function DUF1239 compare
Psyr_2659 -0.7 -4.8 Protein of unknown function DUF955 compare
Psyr_2294 -0.7 -2.3 conserved hypothetical protein compare
Psyr_1556 -0.7 -0.7 hypothetical protein compare
Psyr_1268 -0.7 -3.6 extracellular solute-binding protein, family 3:SLT compare
Psyr_1615 -0.7 -1.8 Patatin compare
Psyr_1728 -0.7 -1.8 tRNA--hydroxylase compare
Psyr_0394 -0.7 -2.2 Heat shock protein HslU compare
Psyr_0531 -0.7 -1.7 LmbE-like protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Aristolochic Acid across organisms