Experiment set10IT017 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Varel_Bryant_medium_Glucose with Levofloxacin 0.0015625 mM

200 most important genes:

  gene name fitness t score description  
BT3164 -4.2 -7.4 quinolinate synthetase A (NCBI ptt file) compare
BT3395 -3.7 -8.1 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT0067 -3.6 -2.4 hypothetical protein (NCBI ptt file) compare
BT1860 -3.4 -4.0 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT3759 -3.3 -9.2 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT3733 -3.3 -10.6 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT2402 -3.3 -11.8 phosphoglycerate mutase (NCBI ptt file) compare
BT0892 -3.2 -2.2 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT1377 -3.2 -3.1 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT2074 -3.2 -7.9 ketol-acid reductoisomerase (NCBI ptt file) compare
BT3549 -3.2 -5.7 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT1857 -3.2 -6.7 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT2078 -3.2 -9.9 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT1983 -3.1 -8.8 hemolysin III (NCBI ptt file) compare
BT3918 -3.1 -4.6 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT3933 -3.1 -5.5 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT2403 -3.1 -9.3 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT1861 -3.0 -6.4 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT1379 -3.0 -4.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT3184 -3.0 -15.1 L-aspartate oxidase (NCBI ptt file) compare
BT3761 -3.0 -5.6 N-succinylglutamate synthase (from data) compare
BT2415 -3.0 -11.3 aspartate aminotransferase (NCBI ptt file) compare
BT3760 -2.8 -5.6 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT0532 -2.8 -4.3 anthranilate synthase component I (NCBI ptt file) compare
BT3758 -2.8 -3.8 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT1859 -2.8 -1.9 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT1843 -2.8 -2.7 adenylosuccinate synthetase (NCBI ptt file) compare
BT1844 -2.8 -3.3 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT0528 -2.8 -3.2 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT3320 -2.7 -7.3 dihydrodipicolinate reductase (NCBI ptt file) compare
BT2401 -2.7 -8.7 threonine synthase (NCBI ptt file) compare
BT1153 -2.7 -4.1 phosphoserine aminotransferase (NCBI ptt file) compare
BT3717 -2.7 -3.1 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT0200 -2.7 -1.8 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT0201 -2.7 -2.6 histidinol dehydrogenase (NCBI ptt file) compare
BT3757 -2.6 -6.6 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT3193 -2.6 -13.8 putative coenzyme A transferase (NCBI ptt file) compare
BT1607 -2.6 -2.5 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT3253 -2.6 -1.7 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT0531 -2.6 -2.4 anthranilate synthase component II (NCBI ptt file) compare
BT2836 -2.5 -15.2 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT1270 -2.5 -2.4 putative Na+/H+ antiporter (NCBI ptt file) compare
BT0891 -2.5 -1.7 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT0527 -2.4 -2.3 tryptophan synthase alpha chain (NCBI ptt file) compare
BT2837 -2.4 -11.7 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT0738 -2.4 -2.3 serine hydroxymethyltransferase (NCBI ptt file) compare
BT1858 -2.4 -5.7 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT0548 -2.4 -1.6 diaminopimelate epimerase (NCBI ptt file) compare
BT2076 -2.3 -7.1 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT0202 -2.3 -4.1 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT3718 -2.2 -9.1 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT1374 -2.2 -5.5 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT0860 -2.2 -1.4 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1363 -2.2 -1.4 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT1381 -2.1 -4.0 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT1378 -2.1 -2.4 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT3719 -2.0 -4.2 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT2077 -2.0 -5.0 acetolactate synthase large subunit (NCBI ptt file) compare
BT0700 -2.0 -4.2 GTP pyrophosphokinase (NCBI ptt file) compare
BT0529 -2.0 -1.3 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT0215 -2.0 -2.2 iron uptake regulatory protein (NCBI ptt file) compare
BT4339 -2.0 -1.8 glutamine synthetase (NCBI ptt file) compare
BT1733 -2.0 -3.7 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT4211 -1.9 -1.3 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT2003 -1.9 -1.8 putative membrane peptidase (NCBI ptt file) compare
BT0530 -1.9 -3.7 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT0533 -1.8 -1.7 tryptophan synthase beta chain (NCBI ptt file) compare
BT3936 -1.8 -1.2 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT3361 -1.8 -5.1 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT0378 -1.8 -1.6 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT2283 -1.7 -1.6 hypothetical protein (NCBI ptt file) compare
BT1476 -1.7 -3.4 aspartate aminotransferase (NCBI ptt file) compare
BT1193 -1.7 -3.7 conserved hypothetical protein (NCBI ptt file) compare
BT2122 -1.6 -1.8 lysyl-tRNA synthetase (NCBI ptt file) compare
BT3035 -1.6 -9.7 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT4562 -1.6 -1.1 hypothetical protein (NCBI ptt file) compare
BT3371 -1.6 -2.8 putative glycosyltransferase yibD (NCBI ptt file) compare
BT1220 -1.6 -2.0 6-phosphogluconolactonase (NCBI ptt file) compare
BT0736 -1.6 -2.1 putative transport protein (NCBI ptt file) compare
BT3074 -1.6 -4.7 conserved hypothetical protein (NCBI ptt file) compare
BT0704 -1.6 -2.0 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT1970 -1.6 -7.3 glutamate dehydrogenase (NCBI ptt file) compare
BT0545 -1.6 -2.0 nitrogen regulatory protein P-II (NCBI ptt file) compare
BT2080 -1.5 -2.7 L-cysteine desulfidase cdsB (from data) compare
BT1746 -1.5 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT2173 -1.5 -5.6 hypothetical protein (NCBI ptt file) compare
BT0080 -1.5 -2.5 hypothetical protein (NCBI ptt file) compare
BT3223 -1.4 -2.3 hypothetical protein (NCBI ptt file) compare
BT2417 -1.4 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT4191 -1.4 -6.9 hypothetical protein (NCBI ptt file) compare
BT0519 -1.4 -3.3 hypothetical protein (NCBI ptt file) compare
BT4328 -1.4 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT0783 -1.4 -1.3 hypothetical protein (NCBI ptt file) compare
BT1375 -1.4 -6.7 aspartokinase (NCBI ptt file) compare
BT3220 -1.4 -7.1 TPR-repeat-containing protein (NCBI ptt file) compare
BT3376 -1.4 -4.6 nucleotide sugar transaminase (NCBI ptt file) compare
BT0175 -1.4 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0771 -1.4 -3.2 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT4487 -1.4 -3.6 putative membrane-bound lytic murein transglycosylase (NCBI ptt file) compare
BT1752 -1.4 -0.9 hypothetical protein (NCBI ptt file) compare
BT1336 -1.3 -3.1 putative translation initiation inhibitor (NCBI ptt file) compare
BT1723 -1.3 -4.5 polysialic acid transport protein kpsD precursor (NCBI ptt file) compare
BT3980 -1.3 -1.6 hypothetical protein (NCBI ptt file) compare
BT2155 -1.3 -3.9 hypothetical protein (NCBI ptt file) compare
BT1419 -1.3 -2.1 hypothetical protein (NCBI ptt file) compare
BT0876 -1.3 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1979 -1.3 -2.6 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT0016 -1.3 -2.1 hypothetical protein (NCBI ptt file) compare
BT2148 -1.2 -2.3 glycosyltransferase (NCBI ptt file) compare
BT1201 -1.2 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3639 -1.2 -3.5 ThiF family protein, putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis (NCBI ptt file) compare
BT1894 -1.2 -4.1 TPR-repeat-containing proteins (NCBI ptt file) compare
BT1341 -1.2 -3.0 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT3554 -1.2 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1361 -1.2 -4.3 DNA repair protein recN (Recombination protein N) (NCBI ptt file) compare
BT0731 -1.2 -1.5 hypothetical protein (NCBI ptt file) compare
BT3911 -1.2 -2.1 malate dehydrogenase (NCBI ptt file) compare
BT1262 -1.2 -1.1 putative transcriptional regulator (NCBI ptt file) compare
BT2418 -1.2 -2.9 hypothetical protein (NCBI ptt file) compare
BT1195 -1.2 -1.8 monofunctional biosynthetic peptidoglycan transglycosylase (NCBI ptt file) compare
BT2129 -1.2 -4.5 aspartate--ammonia ligase (NCBI ptt file) compare
BT2546 -1.1 -5.4 transcriptional regulator (NCBI ptt file) compare
BT1315 -1.1 -2.1 ribonuclease BN (NCBI ptt file) compare
BT2309 -1.1 -3.2 hypothetical protein (NCBI ptt file) compare
BT1981 -1.1 -1.9 hypothetical protein (NCBI ptt file) compare
BT0848 -1.1 -1.6 hypothetical protein (NCBI ptt file) compare
BT0281 -1.1 -2.9 putative DNA-binding protein (NCBI ptt file) compare
BT2539 -1.1 -2.3 rubredoxin (NCBI ptt file) compare
BT1421 -1.1 -2.0 hypothetical protein (NCBI ptt file) compare
BT0923 -1.1 -1.3 putative periplasmic protein (NCBI ptt file) compare
BT2169 -1.1 -2.8 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0927 -1.1 -1.0 two-component system sensor histidine kinase (NCBI ptt file) compare
BT2172 -1.1 -6.4 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0616 -1.1 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1152 -1.1 -1.4 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT1854 -1.1 -0.9 putative membrane-associated phospholipid phosphatase (NCBI ptt file) compare
BT0107 -1.1 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1018 -1.1 -2.3 polygalacturonase (Pectinase) (NCBI ptt file) compare
BT3724 -1.0 -1.7 cationic outer membrane protein precursor (NCBI ptt file) compare
BT4381 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT0035 -1.0 -1.8 hypothetical protein (NCBI ptt file) compare
BT1342 -1.0 -3.8 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT0739 -1.0 -1.5 hypothetical protein (NCBI ptt file) compare
BT1564 -1.0 -1.1 conserved hypothetical protein (NCBI ptt file) compare
BT1588 -1.0 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT4595 -1.0 -2.1 hypothetical protein (NCBI ptt file) compare
BT2843 -1.0 -1.8 integrase (NCBI ptt file) compare
BT3394 -1.0 -4.1 putative arginine decarboxylase (NCBI ptt file) compare
BT2153 -1.0 -1.7 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT2142 -1.0 -1.1 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT2742 -1.0 -0.6 integrase, site-specific recombinase (NCBI ptt file) compare
BT0437 -1.0 -0.9 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT3224 -1.0 -2.3 putative lysine decarboxylase (NCBI ptt file) compare
BT4206 -1.0 -1.2 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NCBI ptt file) compare
BT0560 -1.0 -1.6 outer membrane efflux protein (NCBI ptt file) compare
BT0323 -1.0 -1.7 hypothetical protein (NCBI ptt file) compare
BT2045 -1.0 -1.1 hypothetical protein (NCBI ptt file) compare
BT0913 -1.0 -2.2 putative Fe-S oxidoreductase (NCBI ptt file) compare
BT3372 -1.0 -3.3 glycosyltransferase (NCBI ptt file) compare
BT3819 -1.0 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT0443 -1.0 -0.9 thermostable beta-glucosidase B (NCBI ptt file) compare
BT0912 -1.0 -1.0 DNA-binding protein HU (NCBI ptt file) compare
BT2598 -1.0 -2.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1837 -1.0 -3.9 putative GTP-binding protein, putative GTPase (NCBI ptt file) compare
BT3342 -1.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT0249 -1.0 -1.6 5-methyltetrahydrofolate--homocysteine methyltransferase or methionine synthase (NCBI ptt file) compare
BT0827 -1.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT4454 -1.0 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT4421 -0.9 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1130 -0.9 -1.6 hypothetical protein (NCBI ptt file) compare
BT0638 -0.9 -2.7 putative methionine aminopeptidase A (NCBI ptt file) compare
BT1343 -0.9 -2.8 putative capsule biosynthesis protein (NCBI ptt file) compare
BT1080 -0.9 -1.2 hypothetical protein (NCBI ptt file) compare
BT1392 -0.9 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1022 -0.9 -1.4 hypothetical protein (NCBI ptt file) compare
BT0213 -0.9 -2.8 hypothetical protein (NCBI ptt file) compare
BT1713 -0.9 -1.7 putative acylneuraminate cytidylyltransferase (NCBI ptt file) compare
BT4703 -0.9 -2.2 chloromuconate cycloisomerase (NCBI ptt file) compare
BT3694 -0.9 -1.1 glycosyltransferase (NCBI ptt file) compare
BT2684 -0.9 -1.0 hypothetical protein (NCBI ptt file) compare
BT0617 -0.9 -1.1 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfB (NCBI ptt file) compare
BT0189 -0.9 -2.0 conserved hypothetical protein, putative anti-sigma factor (NCBI ptt file) compare
BT4644 -0.9 -1.9 putative anti-sigma factor (NCBI ptt file) compare
BT1972 -0.9 -5.4 phosphoenolpyruvate synthase/pyruvate phosphate dikinase (NCBI ptt file) compare
BT0184 -0.9 -2.5 uridine kinase (uridine monophosphokinase) (NCBI ptt file) compare
BT3981 -0.9 -1.9 hypothetical protein (NCBI ptt file) compare
BT0936 -0.9 -1.2 hypothetical protein (NCBI ptt file) compare
BT1718 -0.9 -2.9 putative 2-aminoethylphosphonate pyruvate aminotransferase (NCBI ptt file) compare
BT3286 -0.9 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1569 -0.9 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1346 -0.9 -2.5 capsule biosynthesis protein capA (NCBI ptt file) compare
BT0922 -0.9 -2.5 hypothetical protein (NCBI ptt file) compare
BT0152 -0.9 -2.7 acetyl esterase (acetylxylosidase) (NCBI ptt file) compare
BT0048 -0.9 -1.6 hypothetical protein (NCBI ptt file) compare
BT1339 -0.9 -3.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file) compare
BT4018 -0.9 -1.3 hypothetical protein (NCBI ptt file) compare
BT0941 -0.9 -1.9 hypothetical protein (NCBI ptt file) compare
BT0503 -0.9 -1.2 hypothetical protein (NCBI ptt file) compare
BT4601 -0.9 -1.9 hypothetical protein (NCBI ptt file) compare
BT4002 -0.9 -1.1 ATPase, ParA family (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in stress experiments

For stress Levofloxacin across organisms