| | gene | name | fitness | t score | description | |
|---|
| Pf1N1B4_5619 | | +4.9 | 35.9 | BarA-associated response regulator UvrY (= GacA = SirA) | compare |
| Pf1N1B4_3501 | | +4.3 | 35.0 | BarA sensory histidine kinase (= VarS = GacS) | compare |
| Pf1N1B4_3115 | | +3.9 | 29.5 | RNA polymerase sigma factor RpoS | compare |
| Pf1N1B4_1185 | | +3.8 | 19.1 | Lactate-responsive regulator LldR in Enterobacteria, GntR family | compare |
| Pf1N1B4_5924 | | +2.2 | 12.6 | hypothetical protein | compare |
| Pf1N1B4_218 | | +2.2 | 16.6 | Periplasmic binding protein | compare |
| Pf1N1B4_5224 | | +2.1 | 6.0 | tRNA-Arg-CCT | compare |
| Pf1N1B4_5926 | | +2.1 | 15.1 | hypothetical protein | compare |
| Pf1N1B4_5925 | | +2.0 | 13.0 | hypothetical protein | compare |
| Pf1N1B4_1619 | | +1.9 | 14.8 | Carboxyl-terminal protease (EC 3.4.21.102) | compare |
| Pf1N1B4_2917 | | +1.8 | 11.8 | FIG140336: TPR domain protein | compare |
| Pf1N1B4_2381 | | +1.7 | 12.3 | Protein yceI precursor | compare |
| Pf1N1B4_2169 | | +1.6 | 5.6 | FIG00953808: hypothetical protein | compare |
| Pf1N1B4_2380 | | +1.6 | 13.3 | Cytochrome B561 | compare |
| Pf1N1B4_287 | | +1.6 | 8.5 | Possible periplasmic thiredoxin | compare |
| Pf1N1B4_3325 | | +1.6 | 3.9 | Sigma factor RpoE negative regulatory protein RseB precursor | compare |
| Pf1N1B4_407 | | +1.5 | 3.7 | ADP-ribosylglycohydrolase YegU (EC 3.2.-.-) | compare |
| Pf1N1B4_5376 | | +1.5 | 1.5 | hypothetical protein | compare |
| Pf1N1B4_1190 | | +1.5 | 10.0 | Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing | compare |
| Pf1N1B4_3549 | | +1.4 | 5.2 | YciL protein | compare |
| Pf1N1B4_4357 | | +1.4 | 5.3 | Putrescine utilization regulator | compare |
| Pf1N1B4_288 | | +1.4 | 9.2 | FIG00958794: hypothetical protein | compare |
| Pf1N1B4_5508 | | +1.4 | 2.1 | hypothetical protein | compare |
| Pf1N1B4_5055 | | +1.3 | 6.6 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase PhaG (3-hydroxyacyl-CoA-acyl carrier protein transferase) (EC 2.4.1.-) | compare |
| Pf1N1B4_108 | | +1.3 | 2.4 | FIG00954456: hypothetical protein | compare |
| Pf1N1B4_1474 | | +1.3 | 7.4 | Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) | compare |
| Pf1N1B4_866 | | +1.3 | 1.7 | Iron-sulfur cluster regulator IscR | compare |
| Pf1N1B4_3911 | | +1.3 | 5.1 | Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family | compare |
| Pf1N1B4_286 | | +1.2 | 7.4 | 2-dehydropantoate 2-reductase (EC 1.1.1.169) | compare |
| Pf1N1B4_629 | | +1.2 | 2.3 | Queuosine Biosynthesis QueE Radical SAM | compare |
| Pf1N1B4_2837 | | +1.2 | 5.9 | FIG00956650: hypothetical protein | compare |
| Pf1N1B4_5737 | | +1.2 | 2.3 | Nitrate/nitrite transporter | compare |
| Pf1N1B4_1668 | | +1.2 | 4.0 | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | compare |
| Pf1N1B4_3316 | | +1.2 | 4.0 | Tricarboxylate transport transcriptional regulator TctD | compare |
| Pf1N1B4_1115 | | +1.2 | 6.4 | Dna binding response regulator PrrA (RegA) | compare |
| Pf1N1B4_224 | | +1.2 | 1.9 | Isohexenylglutaconyl-CoA hydratase | compare |
| Pf1N1B4_2114 | | +1.1 | 5.1 | DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) | compare |
| Pf1N1B4_2401 | | +1.1 | 1.3 | Lipoprotein, putative | compare |
| Pf1N1B4_157 | | +1.1 | 2.9 | ThiJ/PfpI family protein | compare |
| Pf1N1B4_4448 | | +1.1 | 2.0 | COGs COG2343 | compare |
| Pf1N1B4_4855 | | +1.1 | 4.0 | Response regulator | compare |
| Pf1N1B4_3451 | | +1.1 | 3.2 | Aspartokinase (EC 2.7.2.4) | compare |
| Pf1N1B4_3619 | | +1.1 | 3.0 | Flagellar biosynthesis protein FliQ | compare |
| Pf1N1B4_441 | | +1.1 | 2.9 | hypothetical protein | compare |
| Pf1N1B4_2163 | | +1.1 | 2.7 | hypothetical protein | compare |
| Pf1N1B4_4303 | | +1.1 | 3.3 | DipZ protein | compare |
| Pf1N1B4_4897 | | +1.0 | 2.2 | Transcriptional regulator, LysR family | compare |
| Pf1N1B4_4657 | | +1.0 | 3.0 | Oxidoreductase probably involved in sulfite reduction | compare |
| Pf1N1B4_2359 | | +1.0 | 2.5 | Chemotaxis signal transduction protein | compare |
| Pf1N1B4_3069 | | +1.0 | 2.9 | FIG00954614: hypothetical protein | compare |
| Pf1N1B4_5916 | | +1.0 | 2.6 | Similar to non-heme chloroperoxidase, sll5080 homolog | compare |
| Pf1N1B4_1866 | | +1.0 | 1.8 | Methionine ABC transporter ATP-binding protein | compare |
| Pf1N1B4_5973 | | +1.0 | 3.3 | Probable permease of ABC transporter | compare |
| Pf1N1B4_611 | | +1.0 | 3.2 | CoA transferase, CAIB/BAIF family | compare |
| Pf1N1B4_2190 | | +1.0 | 5.9 | Regulator of sigma D | compare |
| Pf1N1B4_5289 | | +1.0 | 2.5 | hypothetical protein | compare |
| Pf1N1B4_3191 | | +1.0 | 1.6 | FIG00953505: hypothetical protein | compare |
| Pf1N1B4_1180 | | +1.0 | 0.8 | Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex | compare |
| Pf1N1B4_2360 | | +1.0 | 1.4 | hypothetical protein | compare |
| Pf1N1B4_516 | | +1.0 | 2.2 | Sensor histidine kinase | compare |
| Pf1N1B4_5378 | | +1.0 | 2.3 | Phage protein | compare |
| Pf1N1B4_4729 | | +1.0 | 1.9 | Hemolysin-type calcium-binding region | compare |
| Pf1N1B4_1884 | | +1.0 | 6.1 | Sensory box histidine kinase | compare |
| Pf1N1B4_205 | | +1.0 | 3.0 | Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76) | compare |
| Pf1N1B4_4830 | | +1.0 | 2.9 | Membrane fusion component of tripartite multidrug resistance system | compare |
| Pf1N1B4_1188 | | +1.0 | 6.7 | Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF | compare |
| Pf1N1B4_3836 | | +1.0 | 1.4 | Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) | compare |
| Pf1N1B4_3599 | | +1.0 | 2.9 | Flagellar regulatory protein FleQ | compare |
| Pf1N1B4_3627 | | +1.0 | 1.0 | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | compare |
| Pf1N1B4_381 | | +1.0 | 1.5 | hypothetical protein | compare |
| Pf1N1B4_4560 | | +1.0 | 1.9 | Transcriptional regulator, MerR family | compare |
| Pf1N1B4_5797 | | +1.0 | 1.2 | 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) | compare |
| Pf1N1B4_290 | | +1.0 | 8.8 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | compare |
| Pf1N1B4_4234 | | +1.0 | 2.4 | putative transport protein | compare |
| Pf1N1B4_3420 | | +1.0 | 2.0 | Transcriptional regulator, AraC family | compare |
| Pf1N1B4_3494 | | +1.0 | 2.3 | Flavoprotein WrbA | compare |
| Pf1N1B4_324 | | +0.9 | 2.9 | Glycosyl transferase, group 2 family protein | compare |
| Pf1N1B4_507 | | +0.9 | 2.1 | FIG00956448: hypothetical protein | compare |
| Pf1N1B4_1891 | | +0.9 | 2.3 | ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C | compare |
| Pf1N1B4_2776 | | +0.9 | 1.4 | Transcriptional regulator, GntR family | compare |
| Pf1N1B4_1116 | | +0.9 | 5.8 | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | compare |
| Pf1N1B4_2227 | | +0.9 | 1.3 | FIG019278: hypothetical protein | compare |
| Pf1N1B4_4669 | | +0.9 | 1.1 | Heavy metal RND efflux outer membrane protein, CzcC family | compare |
| Pf1N1B4_3141 | | +0.9 | 1.7 | FIG00959768: hypothetical protein | compare |
| Pf1N1B4_3129 | | +0.9 | 1.0 | Prophage baseplate assembly protein V | compare |
| Pf1N1B4_2637 | | +0.9 | 4.2 | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | compare |
| Pf1N1B4_2458 | | +0.9 | 1.6 | Sarcosine oxidase gamma subunit (EC 1.5.3.1) | compare |
| Pf1N1B4_3979 | | +0.9 | 3.2 | MFS permease protein | compare |
| Pf1N1B4_3794 | | +0.9 | 3.1 | hypothetical protein | compare |
| Pf1N1B4_740 | | +0.9 | 1.8 | Leucyl-tRNA synthetase | compare |
| Pf1N1B4_1189 | | +0.9 | 3.5 | Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG | compare |
| Pf1N1B4_4414 | | +0.9 | 2.4 | Bll6261 protein | compare |
| Pf1N1B4_904 | | +0.9 | 1.3 | DNA-binding protein HU-beta | compare |
| Pf1N1B4_3785 | | +0.9 | 1.6 | FOG: Ankyrin repeat | compare |
| Pf1N1B4_5854 | | +0.9 | 4.0 | FIG00960144: hypothetical protein | compare |
| Pf1N1B4_2069 | | +0.9 | 3.2 | Outer membrane protein ImpK/VasF, OmpA/MotB domain | compare |
| Pf1N1B4_2820 | | +0.9 | 1.2 | FIG00953647: hypothetical protein | compare |
| Pf1N1B4_2853 | | +0.9 | 1.4 | Pantoate--beta-alanine ligase (EC 6.3.2.1) | compare |
| Pf1N1B4_1334 | | +0.9 | 1.8 | FIG00955840: hypothetical protein | compare |
| Pf1N1B4_102 | | +0.9 | 1.3 | Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) | compare |
| Pf1N1B4_3729 | | +0.9 | 1.2 | Quaternary ammonium compound-resistance protein SugE | compare |
| Pf1N1B4_5095 | | +0.9 | 1.3 | hypothetical protein | compare |
| Pf1N1B4_1527 | | +0.9 | 1.9 | Queuosine Biosynthesis QueC ATPase | compare |
| Pf1N1B4_4192 | | +0.9 | 1.6 | Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase | compare |
| Pf1N1B4_3811 | | +0.9 | 1.6 | Hydantoin racemase (EC 5.1.99.-) | compare |
| Pf1N1B4_5041 | | +0.9 | 2.2 | Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) | compare |
| Pf1N1B4_3149 | | +0.9 | 1.2 | hypothetical protein | compare |
| Pf1N1B4_248 | | +0.9 | 2.8 | EAL-domain protein | compare |
| Pf1N1B4_2783 | | +0.9 | 1.5 | Transcription elongation factor GreB-related protein | compare |
| Pf1N1B4_230 | | +0.8 | 0.6 | FIG00953472: hypothetical protein | compare |
| Pf1N1B4_5591 | | +0.8 | 1.9 | Vanillin dehydrogenase (Hydroxybenzaldehyde dehydrogenase) (EC 1.2.1.28) | compare |
| Pf1N1B4_2733 | | +0.8 | 1.8 | DNA polymerase III alpha subunit (EC 2.7.7.7) | compare |
| Pf1N1B4_3508 | | +0.8 | 1.4 | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | compare |
| Pf1N1B4_5353 | | +0.8 | 2.5 | hypothetical protein | compare |
| Pf1N1B4_2168 | | +0.8 | 3.5 | FIG004064: hypothetical protein | compare |
| Pf1N1B4_359 | | +0.8 | 2.6 | GGDEF domain protein | compare |
| Pf1N1B4_339 | | +0.8 | 1.0 | UDP-glucose 4-epimerase (EC 5.1.3.2) | compare |
| Pf1N1B4_1055 | | +0.8 | 2.3 | Phosphate acetyltransferase (EC 2.3.1.8) | compare |
| Pf1N1B4_5279 | | +0.8 | 2.6 | hypothetical protein | compare |
| Pf1N1B4_3607 | | +0.8 | 2.7 | Flagellum-specific ATP synthase FliI | compare |
| Pf1N1B4_5284 | | +0.8 | 2.3 | hypothetical protein | compare |
| Pf1N1B4_4568 | | +0.8 | 2.0 | FIG00793915: hypothetical protein | compare |
| Pf1N1B4_5927 | | +0.8 | 7.0 | Capsular polysaccharide biosynthesis protein | compare |
| Pf1N1B4_5718 | | +0.8 | 1.7 | Transcriptional regulator, Cro/CI family | compare |
| Pf1N1B4_476 | | +0.8 | 2.0 | ABC-type multidrug transport system, ATPase component | compare |
| Pf1N1B4_2400 | | +0.8 | 1.8 | FIG00955006: hypothetical protein | compare |
| Pf1N1B4_2437 | | +0.8 | 3.6 | Microsomal dipeptidase (EC 3.4.13.19) | compare |
| Pf1N1B4_1336 | | +0.8 | 0.7 | Putative multicopper oxidases | compare |
| Pf1N1B4_4531 | | +0.8 | 1.6 | FIG01221261: hypothetical protein | compare |
| Pf1N1B4_5860 | | +0.8 | 2.1 | Two-component response regulator | compare |
| Pf1N1B4_3552 | | +0.8 | 2.3 | Hypothetical YciO protein, TsaC/YrdC paralog | compare |
| Pf1N1B4_5549 | | +0.8 | 2.1 | hypothetical protein | compare |
| Pf1N1B4_1882 | | +0.8 | 7.3 | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) | compare |
| Pf1N1B4_3111 | | +0.8 | 1.6 | tRNA pseudouridine 13 synthase (EC 4.2.1.-) | compare |
| Pf1N1B4_2061 | | +0.8 | 1.8 | hypothetical protein | compare |
| Pf1N1B4_4390 | | +0.8 | 1.8 | Transcriptional regulator, LacI family | compare |
| Pf1N1B4_485 | | +0.8 | 1.7 | L-lysine permease | compare |
| Pf1N1B4_5105 | | +0.8 | 2.2 | Peptide ABC transporter, ATP-binding protein | compare |
| Pf1N1B4_4824 | | +0.8 | 1.9 | Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) | compare |
| Pf1N1B4_3153 | | +0.8 | 1.6 | hypothetical protein | compare |
| Pf1N1B4_708 | | +0.8 | 2.9 | Chromosome initiation inhibitor | compare |
| Pf1N1B4_3364 | | +0.8 | 2.0 | Cyn operon transcriptional activator | compare |
| Pf1N1B4_3117 | | +0.8 | 4.2 | DNA mismatch repair protein MutS | compare |
| Pf1N1B4_296 | | +0.8 | 1.9 | ABC transporter ATP-binding protein YvcR | compare |
| Pf1N1B4_3621 | | +0.8 | 2.8 | Flagellar biosynthesis protein FlhB | compare |
| Pf1N1B4_5904 | | +0.8 | 1.6 | FIG00955320: hypothetical protein | compare |
| Pf1N1B4_1441 | | +0.8 | 4.7 | Putative esterase, FIGfam005057 | compare |
| Pf1N1B4_1984 | | +0.8 | 2.2 | Threonyl-tRNA synthetase (EC 6.1.1.3) | compare |
| Pf1N1B4_3614 | | +0.8 | 2.3 | Flagellar biosynthesis protein FliL | compare |
| Pf1N1B4_1475 | | +0.8 | 3.6 | FIG00962376: hypothetical protein | compare |
| Pf1N1B4_5043 | | +0.8 | 1.3 | hypothetical protein | compare |
| Pf1N1B4_2085 | | +0.8 | 1.6 | Uncharacterized protein similar to VCA0109 | compare |
| Pf1N1B4_2334 | | +0.8 | 2.2 | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | compare |
| Pf1N1B4_2382 | | +0.8 | 5.4 | ATP-dependent RNA helicase RhlE | compare |
| Pf1N1B4_5898 | | +0.8 | 1.3 | hypothetical protein | compare |
| Pf1N1B4_3176 | | +0.8 | 1.8 | Succinylglutamate desuccinylase/aspartoacylase | compare |
| Pf1N1B4_1675 | | +0.7 | 1.6 | Transcriptional regulator | compare |
| Pf1N1B4_842 | | +0.7 | 2.8 | putative membrane protein | compare |
| Pf1N1B4_5061 | | +0.7 | 1.4 | Valyl-tRNA synthetase | compare |
| Pf1N1B4_1679 | | +0.7 | 1.2 | Membrane-fusion protein | compare |
| Pf1N1B4_2925 | | +0.7 | 1.1 | hypothetical protein | compare |
| Pf1N1B4_4759 | | +0.7 | 1.1 | Proteinase inhibitor I11, ecotin precursor | compare |
| Pf1N1B4_5972 | | +0.7 | 1.1 | Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) | compare |
| Pf1N1B4_2193 | | +0.7 | 1.8 | hypothetical protein | compare |
| Pf1N1B4_890 | | +0.7 | 2.1 | DNA recombination and repair protein RecO | compare |
| Pf1N1B4_733 | | +0.7 | 1.0 | Methionyl-tRNA synthetase (EC 6.1.1.10) | compare |
| Pf1N1B4_2436 | | +0.7 | 2.8 | FIG00953563: hypothetical protein | compare |
| Pf1N1B4_4851 | | +0.7 | 1.7 | Transcriptional regulator of various polyols utilization, AraC family | compare |
| Pf1N1B4_1248 | | +0.7 | 2.5 | Probable short-chain dehydrogenase | compare |
| Pf1N1B4_4250 | | +0.7 | 2.2 | Methyltransferase (EC 2.1.1.-) | compare |
| Pf1N1B4_4218 | | +0.7 | 1.4 | Multidrug resistance protein A | compare |
| Pf1N1B4_4320 | | +0.7 | 1.8 | Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1) | compare |
| Pf1N1B4_3622 | | +0.7 | 3.2 | Flagellar biosynthesis protein FlhA | compare |
| Pf1N1B4_4293 | | +0.7 | 1.6 | hypothetical protein | compare |
| Pf1N1B4_131 | | +0.7 | 1.2 | hypothetical protein | compare |
| Pf1N1B4_4241 | | +0.7 | 3.4 | Dienelactone hydrolase family | compare |
| Pf1N1B4_3413 | | +0.7 | 1.5 | Transcriptional regulator, LysR family | compare |
| Pf1N1B4_619 | | +0.7 | 0.9 | Sigma-54 dependent transcriptional regulator/sensory box protein | compare |
| Pf1N1B4_1669 | | +0.7 | 3.7 | ADP compounds hydrolase NudE (EC 3.6.1.-) | compare |
| Pf1N1B4_5261 | | +0.7 | 1.3 | hypothetical protein | compare |
| Pf1N1B4_3841 | | +0.7 | 3.5 | Nitrate ABC transporter, nitrate-binding protein | compare |
| Pf1N1B4_1555 | | +0.7 | 4.5 | Polyhydroxyalkanoic acid synthase | compare |
| Pf1N1B4_1722 | | +0.7 | 2.3 | transcriptional regulator, Crp/Fnr family | compare |
| Pf1N1B4_1350 | | +0.7 | 1.1 | GCN5-related N-acetyltransferase | compare |
| Pf1N1B4_1051 | | +0.7 | 3.2 | Glutathione peroxidase family protein | compare |
| Pf1N1B4_1705 | | +0.7 | 1.2 | SAM-dependent methyltransferases | compare |
| Pf1N1B4_5616 | | +0.7 | 2.5 | Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) | compare |
| Pf1N1B4_5109 | | +0.7 | 2.5 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases | compare |
| Pf1N1B4_1403 | | +0.7 | 3.2 | 3'-to-5' exoribonuclease RNase R | compare |
| Pf1N1B4_2476 | | +0.7 | 3.2 | Predicted signal-transduction protein containing cAMP-binding and CBS domains | compare |
| Pf1N1B4_4826 | | +0.7 | 1.2 | glutamine synthetase family protein | compare |
| Pf1N1B4_4143 | | +0.7 | 1.7 | hypothetical protein | compare |
| Pf1N1B4_2680 | | +0.7 | 4.9 | MORN repeat family protein | compare |
| Pf1N1B4_242 | | +0.7 | 2.7 | Glutathione-regulated potassium-efflux system protein KefB | compare |
| Pf1N1B4_815 | | +0.7 | 3.1 | iron-chelator utilization protein | compare |
| Pf1N1B4_3975 | | +0.7 | 1.6 | Transcriptional regulator, IclR family | compare |
| Pf1N1B4_328 | | +0.7 | 2.5 | Glucosyltransferase (side chain biosynthesis) (EC 2.4.1.-) | compare |
| Pf1N1B4_389 | | +0.7 | 3.9 | Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) | compare |
| Pf1N1B4_5460 | | +0.7 | 1.1 | TolA protein | compare |
| Pf1N1B4_1444 | | +0.7 | 3.1 | ADP-ribose pyrophosphatase (EC 3.6.1.13) | compare |