Experiment set10H38 for Pseudomonas stutzeri RCH2

Compare to:

Tween 20 carbon source

200 most important genes:

  gene name fitness t score description  
Psest_2088 -6.8 -4.3 Uncharacterized protein conserved in bacteria compare
Psest_0508 -6.7 -8.0 gamma-glutamyl phosphate reductase compare
Psest_1037 -6.5 -4.5 acetolactate synthase, small subunit compare
Psest_3944 -6.5 -6.3 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Psest_0279 -6.4 -6.3 methionine biosynthesis protein MetW compare
Psest_3650 -6.4 -10.6 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_3648 -6.3 -7.5 anthranilate phosphoribosyltransferase compare
Psest_3647 -6.3 -6.1 Indole-3-glycerol phosphate synthase compare
Psest_0153 -6.1 -10.2 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit compare
Psest_0280 -6.0 -12.3 homoserine O-acetyltransferase compare
Psest_3866 -5.9 -16.6 threonine ammonia-lyase, biosynthetic, long form compare
Psest_3299 -5.9 -9.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
Psest_2591 -5.9 -4.1 3-isopropylmalate dehydratase, large subunit compare
Psest_2578 -5.9 -12.5 O-succinylhomoserine sulfhydrylase compare
Psest_2584 -5.7 -5.6 Phosphoribosylanthranilate isomerase compare
Psest_3384 -5.7 -7.8 glutamate 5-kinase compare
Psest_3298 -5.7 -10.9 histidinol dehydrogenase compare
Psest_3864 -5.6 -14.1 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
Psest_2590 -5.6 -2.1 3-isopropylmalate dehydratase, small subunit compare
Psest_0062 -5.6 -13.1 tryptophan synthase, alpha subunit compare
Psest_0063 -5.6 -10.8 tryptophan synthase, beta subunit compare
Psest_0155 -5.5 -7.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
Psest_0152 -5.2 -6.5 Imidazoleglycerol-phosphate dehydratase compare
Psest_0326 -5.2 -18.8 Taurine catabolism dioxygenase TauD, TfdA family. compare
Psest_0313 -5.0 -4.9 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_0325 -5.0 -10.1 Putative threonine efflux protein compare
Psest_3649 -4.8 -11.6 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_0687 -4.7 -10.5 ATP phosphoribosyltransferase, regulatory subunit compare
Psest_2988 -4.6 -8.7 aspartate kinase, monofunctional class compare
Psest_2014 -4.4 -11.8 Isocitrate lyase (EC 4.1.3.1) (from data) conserved
Psest_3943 -4.4 -6.6 Phosphoribosyl-AMP cyclohydrolase compare
Psest_2589 -4.3 -13.0 3-isopropylmalate dehydrogenase compare
Psest_2090 -4.3 -3.9 Protein of unknown function (DUF2970). compare
Psest_1772 -4.0 -5.4 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_2333 -3.7 -2.0 Protein of unknown function (DUF3359). compare
Psest_2579 -3.6 -2.5 amidophosphoribosyltransferase compare
Psest_0419 -3.3 -23.6 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) conserved
Psest_3322 -3.2 -22.2 TIGR02099 family protein compare
Psest_3297 -3.2 -13.2 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
Psest_3721 -3.1 -9.7 Malic enzyme compare
Psest_1473 -3.0 -8.3 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent compare
Psest_1295 -3.0 -6.9 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_1122 -2.9 -17.8 putative adhesin (DUF1302) (from data) compare
Psest_3818 -2.9 -10.0 endoribonuclease L-PSP, putative compare
Psest_3998 -2.9 -8.5 glutamate--cysteine ligase compare
Psest_2329 -2.8 -16.1 Transcriptional regulator compare
Psest_0417 -2.8 -1.9 Acyl-CoA dehydrogenases compare
Psest_0327 -2.8 -4.2 Transcriptional regulator compare
Psest_1686 -2.8 -7.0 fatty acid/phospholipid synthesis protein PlsX compare
Psest_0489 -2.5 -1.7 phosphoserine phosphatase SerB compare
Psest_2730 -2.4 -5.9 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain conserved
Psest_1335 -2.4 -15.3 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) conserved
Psest_1013 -2.2 -1.5 phosphoribosylamine--glycine ligase compare
Psest_0999 -2.2 -2.9 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0164 -2.1 -1.6 Glutaredoxin, GrxC family compare
Psest_3226 -2.1 -1.7 Predicted membrane protein compare
Psest_1474 -2.0 -1.4 phosphoribosylaminoimidazole synthetase compare
Psest_3159 -2.0 -5.4 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_4298 -2.0 -1.8 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_4219 -2.0 -3.4 DNA polymerase I compare
Psest_1870 -1.9 -2.0 Transcriptional regulators compare
Psest_0354 -1.9 -11.4 Malate synthase G (EC 2.3.3.9) (from data) compare
Psest_1704 -1.9 -1.3 Dehydrogenases (flavoproteins) compare
Psest_1123 -1.9 -11.8 adhesin-associated sorting protein (DUF1329) (from data) compare
Psest_4191 -1.8 -3.9 Transcriptional regulator compare
Psest_1923 -1.8 -5.3 adhesin-associated BNR repeat protein (from data) compare
Psest_4405 -1.8 -2.4 hypothetical protein compare
Psest_3872 -1.8 -8.9 FAD/FMN-containing dehydrogenases compare
Psest_0558 -1.8 -1.5 urease, beta subunit compare
Psest_3960 -1.8 -1.5 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_2945 -1.8 -2.0 septum site-determining protein MinC compare
Psest_2946 -1.8 -3.6 septum site-determining protein MinD compare
Psest_2325 -1.7 -9.4 alpha-L-glutamate ligase-related protein compare
Psest_0359 -1.7 -3.1 Transcriptional regulators compare
Psest_2001 -1.7 -2.0 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_3910 -1.7 -1.8 Uncharacterized protein conserved in bacteria compare
Psest_1277 -1.7 -11.3 2-isopropylmalate synthase, yeast type compare
Psest_2324 -1.7 -12.7 hypothetical protein compare
Psest_1999 -1.6 -1.6 pseudouridine synthase compare
Psest_2729 -1.5 -6.8 Signal transduction histidine kinase conserved
Psest_3810 -1.5 -1.4 orotate phosphoribosyltransferase compare
Psest_0575 -1.5 -1.2 HrpA-like helicases compare
Psest_2527 -1.5 -6.1 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_3988 -1.5 -6.2 phosphoenolpyruvate carboxykinase (ATP) compare
Psest_0442 -1.4 -2.7 ATPases of the AAA+ class compare
Psest_0212 -1.4 -2.9 exodeoxyribonuclease V, gamma subunit compare
Psest_2530 -1.4 -4.2 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_1947 -1.4 -0.9 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_2532 -1.3 -2.8 Uncharacterized protein conserved in bacteria compare
Psest_2809 -1.3 -1.9 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psest_0673 -1.3 -4.4 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
Psest_4044 -1.3 -2.9 type I site-specific deoxyribonuclease, HsdR family compare
Psest_0959 -1.3 -2.2 Uncharacterized protein conserved in bacteria compare
Psest_3351 -1.3 -3.9 peptide chain release factor 3 compare
Psest_1660 -1.3 -1.4 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_3391 -1.3 -2.9 Uncharacterized protein conserved in bacteria compare
Psest_1492 -1.2 -7.0 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_1924 -1.2 -10.1 adhesin-associated MmpL efflux pump (from data) compare
Psest_0498 -1.2 -1.0 ribosome small subunit-dependent GTPase A compare
Psest_0969 -1.2 -1.9 transcription elongation factor GreA compare
Psest_1640 -1.2 -8.5 (p)ppGpp synthetase, RelA/SpoT family compare
Psest_4134 -1.2 -2.0 Uncharacterized protein conserved in bacteria compare
Psest_2323 -1.2 -8.5 Uncharacterized protein conserved in archaea compare
Psest_1056 -1.2 -2.2 2-isopropylmalate synthase, bacterial type compare
Psest_4103 -1.2 -1.6 AraC-type DNA-binding domain-containing proteins compare
Psest_2285 -1.2 -2.9 ATP-dependent protease La compare
Psest_2862 -1.1 -6.5 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Psest_3767 -1.1 -3.0 tyrosine recombinase XerC compare
Psest_0260 -1.1 -1.4 Cell division protein compare
Psest_0718 -1.1 -3.1 nicotinate-nucleotide pyrophosphorylase compare
Psest_3860 -1.1 -2.2 Predicted permeases compare
Psest_0066 -1.1 -2.1 Protein of unknown function (DUF3060). compare
Psest_2037 -1.1 -3.9 uroporphyrin-III C-methyltransferase compare
Psest_1567 -1.1 -4.9 Transcriptional regulator compare
Psest_4393 -1.0 -4.3 Capsule polysaccharide export protein compare
Psest_0284 -1.0 -6.8 pyridoxal phosphate enzyme, YggS family compare
Psest_1124 -1.0 -8.2 ATP-dependent transcriptional regulator conserved
Psest_0170 -1.0 -4.1 5,10-methenyltetrahydrofolate synthetase compare
Psest_2304 -1.0 -1.2 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_2764 -1.0 -1.4 hypothetical protein compare
Psest_4085 -1.0 -6.7 Biotin carboxylase compare
Psest_2316 -1.0 -6.8 phosphoenolpyruvate synthase compare
Psest_0401 -1.0 -1.2 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_4084 -1.0 -7.4 oxaloacetate decarboxylase alpha subunit compare
Psest_2104 -1.0 -1.5 IscR-regulated protein YhgI compare
Psest_2810 -1.0 -3.9 5'/3'-nucleotidase SurE compare
Psest_2872 -0.9 -1.4 protein RecA compare
Psest_2646 -0.9 -1.4 SOS regulatory protein LexA compare
Psest_1000 -0.9 -5.9 PAS domain S-box compare
Psest_0958 -0.9 -3.8 Oligoketide cyclase/lipid transport protein compare
Psest_0415 -0.9 -2.6 dethiobiotin synthase compare
Psest_1659 -0.9 -2.1 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_3323 -0.8 -3.4 ribonuclease, Rne/Rng family compare
Psest_3301 -0.8 -2.3 Predicted transcriptional regulator, BolA superfamily compare
Psest_0655 -0.8 -1.2 Chemotaxis signal transduction protein compare
Psest_4343 -0.8 -2.3 Protein of unknown function (DUF3301). compare
Psest_1805 -0.8 -1.5 integration host factor, beta subunit compare
Psest_0805 -0.8 -2.3 hypothetical protein compare
Psest_4086 -0.8 -4.8 Transcriptional regulator compare
Psest_3843 -0.8 -3.6 4-hydroxybenzoate synthetase (chorismate lyase) compare
Psest_0716 -0.8 -1.4 Protein of unknown function (DUF3094). compare
Psest_1857 -0.8 -5.5 Isocitrate dehydrogenase kinase/phosphatase compare
Psest_1532 -0.8 -2.8 DNA recombination-dependent growth factor C compare
Psest_1661 -0.8 -1.3 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_3123 -0.8 -1.8 dihydroorotase, homodimeric type compare
Psest_2585 -0.8 -0.9 pseudouridylate synthase I compare
Psest_4370 -0.8 -1.8 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_2645 -0.8 -3.2 Transcriptional regulator compare
Psest_1115 -0.7 -2.7 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_1509 -0.7 -3.6 quinolinate synthetase complex, A subunit compare
Psest_2863 -0.7 -2.9 Transcriptional regulator compare
Psest_3496 -0.7 -0.9 Predicted metal-binding protein compare
Psest_2057 -0.7 -2.8 Predicted secreted protein compare
Psest_3871 -0.7 -2.5 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) compare
Psest_2744 -0.7 -1.2 Uncharacterized conserved protein compare
Psest_0296 -0.7 -3.8 glutathione synthetase, prokaryotic compare
Psest_3151 -0.7 -2.2 hypothetical protein compare
Psest_3502 -0.7 -1.6 flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family compare
Psest_4363 -0.7 -3.7 ATPases involved in chromosome partitioning compare
Psest_2503 -0.7 -2.2 hypothetical protein compare
Psest_2848 -0.7 -1.7 Multisubunit Na+/H+ antiporter, MnhE subunit compare
Psest_2539 -0.7 -1.4 adenine phosphoribosyltransferase compare
Psest_1506 -0.6 -2.7 queuosine biosynthesis protein QueC compare
Psest_2955 -0.6 -1.4 Predicted transcriptional regulator with C-terminal CBS domains compare
Psest_0542 -0.6 -3.8 AMP nucleosidase compare
Psest_1510 -0.6 -1.9 Putative Zn-dependent protease, contains TPR repeats compare
Psest_0218 -0.6 -1.5 Acyl-CoA hydrolase compare
Psest_3862 -0.6 -4.8 phosphoenolpyruvate-protein phosphotransferase compare
Psest_3710 -0.6 -5.2 glutamate synthase small subunit family protein, proteobacterial compare
Psest_3884 -0.6 -0.7 Signal transduction histidine kinase compare
Psest_1535 -0.6 -2.2 FKBP-type peptidyl-prolyl cis-trans isomerases 1 compare
Psest_4310 -0.6 -1.1 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_3044 -0.6 -2.7 deoxycytidine triphosphate deaminase compare
Psest_3711 -0.6 -4.8 Glutamate synthase domain 2 compare
Psest_0208 -0.6 -3.2 Uncharacterized protein conserved in bacteria compare
Psest_0398 -0.6 -3.2 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain compare
Psest_3304 -0.6 -2.6 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Psest_0292 -0.6 -1.6 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase compare
Psest_3419 -0.6 -3.0 Predicted transcriptional regulators compare
Psest_0412 -0.6 -4.0 8-amino-7-oxononanoate synthase compare
Psest_1872 -0.6 -1.5 selT/selW/selH selenoprotein domain compare
Psest_2327 -0.6 -2.6 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein compare
Psest_0312 -0.6 -2.6 Superfamily II DNA and RNA helicases compare
Psest_1626 -0.6 -1.9 Predicted integral membrane protein compare
Psest_2757 -0.6 -1.0 hypothetical protein compare
Psest_2911 -0.6 -0.9 Protein of unknown function (DUF2945). compare
Psest_3732 -0.6 -3.1 polyphosphate kinase 1 compare
Psest_2670 -0.6 -2.2 Uncharacterized conserved protein compare
Psest_3766 -0.6 -1.1 Uncharacterized protein conserved in bacteria compare
Psest_0662 -0.6 -1.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_1650 -0.6 -2.9 hypothetical protein compare
Psest_0857 -0.6 -1.2 Membrane transporters of cations and cationic drugs compare
Psest_3458 -0.6 -1.3 hypothetical protein compare
Psest_0006 -0.6 -1.6 alkyl hydroperoxide reductase, F subunit compare
Psest_2531 -0.6 -3.7 cytochrome c oxidase accessory protein FixG compare
Psest_3784 -0.6 -1.2 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_0922 -0.6 -1.1 alkylhydroperoxidase AhpD family core domain compare
Psest_2083 -0.6 -2.1 Putative sterol carrier protein compare
Psest_0015 -0.6 -1.1 Tetratricopeptide repeat. compare
Psest_3014 -0.5 -1.0 cob(I)alamin adenosyltransferase compare


Specific Phenotypes

For 9 genes in this experiment

For carbon source Tween 20 in Pseudomonas stutzeri RCH2

For carbon source Tween 20 across organisms