Experiment set10H34 for Pseudomonas stutzeri RCH2

Compare to:

Ethanol carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Psest_2055 -3.8 -8.2 cytochrome c550 (from data) conserved
Psest_2272 -3.7 -13.8 coenzyme PQQ biosynthesis protein C conserved
Psest_2273 -3.4 -9.3 coenzyme PQQ biosynthesis protein B conserved
Psest_2382 -3.3 -15.1 coenzyme PQQ biosynthesis probable peptidase PqqF conserved
Psest_2038 -3.2 -10.0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain conserved
Psest_2048 -2.9 -5.2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_2014 -2.9 -15.2 Isocitrate lyase (EC 4.1.3.1) (from data) compare
Psest_2274 -2.7 -6.3 coenzyme PQQ biosynthesis protein A compare
Psest_2276 -2.6 -6.8 Aldehyde dehydrogenase (EC 1.2.1.3) (from data) conserved
Psest_2044 -2.5 -6.2 ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system conserved
Psest_2040 -2.3 -10.1 alcohol ABC transporter, permease protein conserved
Psest_2042 -2.1 -8.8 PQQ-dependent catabolism-associated beta-propeller protein conserved
Psest_2270 -2.0 -9.0 coenzyme PQQ biosynthesis protein E conserved
Psest_3214 -1.8 -5.8 phosphate acetyltransferase compare
Psest_1922 -1.7 -8.3 aminopeptidase N, Escherichia coli type compare
Psest_2054 -1.6 -8.6 PQQ-dependent dehydrogenase, methanol/ethanol family conserved
Psest_2060 -1.5 -9.4 PQQ-dependent dehydrogenase, methanol/ethanol family conserved
Psest_2267 -1.4 -7.7 PAS domain S-box conserved
Psest_2056 -1.1 -5.3 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain conserved
Psest_2614 +1.1 9.9 Predicted glycosyltransferases compare
Psest_2609 +1.1 9.4 Glycosyltransferase compare
Psest_2381 +1.5 9.9 hypothetical protein compare
Psest_2603 +1.7 12.5 capsular exopolysaccharide family compare
Psest_0108 +1.7 6.1 malonate decarboxylase, epsilon subunit compare
Psest_2600 +1.8 11.5 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis compare
Psest_2604 +1.9 10.7 WbqC-like protein family. compare
Psest_2602 +1.9 12.3 Glycosyltransferases involved in cell wall biogenesis compare
Psest_3192 +3.0 21.2 diguanylate cyclase (GGDEF) domain compare


Specific phenotypes for carbon source Ethanol across organisms