Protein Info for Xcc-8004.584.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Na(+) H(+) antiporter subunit G

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 140 transmembrane" amino acids 7 to 30 (24 residues), see Phobius details amino acids 43 to 63 (21 residues), see Phobius details amino acids 71 to 93 (23 residues), see Phobius details PF03334: PhaG_MnhG_YufB" amino acids 12 to 92 (81 residues), 89.2 bits, see alignment E=8.2e-30 TIGR01300: monovalent cation/proton antiporter, MnhG/PhaG subunit" amino acids 12 to 95 (84 residues), 81.7 bits, see alignment E=1.9e-27

Best Hits

KEGG orthology group: K05564, multicomponent K+:H+ antiporter subunit G (inferred from 100% identity to xcc:XCC0441)

Predicted SEED Role

"Na(+) H(+) antiporter subunit G" in subsystem Sodium Hydrogen Antiporter

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X4V2 at UniProt or InterPro

Protein Sequence (140 amino acids)

>Xcc-8004.584.1 Na(+) H(+) antiporter subunit G (Xanthomonas campestris pv. campestris strain 8004)
MIALTEYLLSALLLVGTFFILIGAFGLVKLSDFFKRLHAPTKASTLGVGCVLLGSVGYHL
FLGVDPQPRELLITVFLFITAPISAHLMAKAALSLMMEDRPEVPNHGDMQKEGLPPAQGD
VGENMETTPDRSTSEHNSSG