Protein Info for Xcc-8004.474.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00355: Rieske
  • amino acids 13 to 94 (82 residues), 61.2 bits, E=7.1e-21
• PF19112: VanA_C
  • amino acids 148 to 345 (198 residues), 174.6 bits, E=2.7e-55

Best Hits

KEGG orthology group: K03862, vanillate monooxygenase [EC: 1.14.13.82] (inferred from 99% identity to xca:xccb100_0389)

Predicted SEED Role

"Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)" in subsystem Phenylpropanoid compound degradation (EC 1.14.13.82)

MetaCyc Pathways

• vanillin and vanillate degradation II (1/2 steps found)

KEGG Metabolic Maps

• 2,4-Dichlorobenzoate degradation

Isozymes

Compare fitness of predicted isozymes for: 1.14.13.82

Use Curated BLAST to search for 1.14.13.82

Sequence Analysis Tools

See A0A0H2X4K5 at UniProt or InterPro

Protein Sequence (358 amino acids)

>Xcc-8004.474.1 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) (Xanthomonas campestris pv. campestris strain 8004)
MSQSKPLFPLNAWYAVAWDHEVKHALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPL
SMGKLRGDDVVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPA
QADVALIPDLHWSHDPAWAGDGRTIHAKCDYRLVLDNLMDLTHETFVHGSSIGQDEVAEA
PFEVVHGDRTVTVSRWMHNIDPPPFWAGQIARHLNYHGKVDRWQIIHFEAPGTIAIDVGV
AITGTGAPQGDRSQGVNGFVLNTITPETDTTCHYFWAFMRNYALHDQSLTTLTREGVTGV
FGEDEAVLEAQQRAIEAHPDHAFYNLNVDAGGMWARRVIDRLIAREQRAGDLSLRMVG