Protein Info for Xcc-8004.378.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Xanthine/uracil/thiamine/ascorbate permease family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 437 transmembrane" amino acids 19 to 37 (19 residues), see Phobius details amino acids 48 to 69 (22 residues), see Phobius details amino acids 78 to 97 (20 residues), see Phobius details amino acids 103 to 122 (20 residues), see Phobius details amino acids 132 to 152 (21 residues), see Phobius details amino acids 170 to 187 (18 residues), see Phobius details amino acids 194 to 213 (20 residues), see Phobius details amino acids 247 to 270 (24 residues), see Phobius details amino acids 290 to 312 (23 residues), see Phobius details amino acids 324 to 342 (19 residues), see Phobius details amino acids 348 to 367 (20 residues), see Phobius details amino acids 381 to 409 (29 residues), see Phobius details amino acids 419 to 436 (18 residues), see Phobius details PF00860: Xan_ur_permease" amino acids 18 to 398 (381 residues), 157.7 bits, see alignment E=1.9e-50

Best Hits

Swiss-Prot: 48% identical to Y326_METJA: Putative permease MJ0326 (MJ0326) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

KEGG orthology group: K06901, putative MFS transporter, AGZA family, xanthine/uracil permease (inferred from 100% identity to xcb:XC_0305)

Predicted SEED Role

"Xanthine/uracil/thiamine/ascorbate permease family protein" in subsystem Purine Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X3A6 at UniProt or InterPro

Protein Sequence (437 amino acids)

>Xcc-8004.378.1 Xanthine/uracil/thiamine/ascorbate permease family protein (Xanthomonas campestris pv. campestris strain 8004)
MRWPNFALAANGSNVRTELLAGATTFLTMAYIVFVNPDILATTGMDHGAVFVATCLAAAF
GSAVMGLLANYPIGMAPGMGLNAFFAFSVVGTLGYSWQQTLGLVFVSGCVFLLLTLTGAR
RWLVDGIPTTLRSAIAAGIGLFLAVIGLQKAGLVVAHPQTLITLGDLHRPEPLLALAGLL
LIGVLELRRVRGAMLLGILAVTAAALALGLVQYRGVIALPPSLAPTLLKLDIAGALQGHA
GEGALTAVLHVVLVFVLVEMFDATGTLMGVAQRAGLLRTTAQRRQFDRALLADSSAILAG
SLLGTSSTTAYVESAAGVQVGGRTGLTALVVAALFLLALLFSPLAAMVPAYATAPALLYL
AAVMLRECAHLQWDDVGEALPAAMCMLAMPFTYSIANGLALGFITYAVLRLGSGRWREVH
PATWAIAGLFVLRYALE