Protein Info for TX73_012345 in Rhodopseudomonas palustris CGA009

Annotation: IucA/IucC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 593 PF04183: IucA_IucC" amino acids 144 to 369 (226 residues), 183.2 bits, see alignment E=6.5e-58 PF06276: FhuF" amino acids 400 to 561 (162 residues), 132.2 bits, see alignment E=2.5e-42

Best Hits

KEGG orthology group: None (inferred from 100% identity to rpa:RPA2390)

Predicted SEED Role

"Anthrachelin biosynthesis protein AsbA @ Siderophore synthetase superfamily, group A @ Siderophore synthetase large component, acetyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (593 amino acids)

>TX73_012345 IucA/IucC family protein (Rhodopseudomonas palustris CGA009)
MHESMREIAERATFQSFANCYRREIDPGMPSQHRPECGDRRTYVEWSCPMAAATLRAEVE
RESLCGPFRFGRVFICRAPDNAWHEIAPLRALYLMVQECYSGIGAARAEALRNEEAELLG
RVLASYQCIADSLQRSSGEAGRTFLDGEQSLMFGHWLHPTPKSRQGMADWQQPTYAPEHR
GQFQLTYFAVDAALLRYGSAGDVSVSGILETLLPEADRPTLRPGEALIPLHPMQAEAVML
SPDIAELAREGRLRRLGPFGAEFSPTSSVRTVYSPAIPWMLKFSLPVRITNSLRINRMPE
LKAGVAMSRLFARTDFLARHPCFRLIRDPAYLTLGLPGRTESGFEIIFRENPFTTGNETK
GITIAALTADPPPHARSRLDVLVREYAAQQGLPVASACRHWFSAYLDCALDPLVRLYNEL
GVALEAHQQNVLLDVSSGLPTASYYRDNQGFYLSNAHRDRLVSLVPETAEIGGLYFDDHV
IQERFAYYLIVNQICSMIARMGQDRLIDEEALLIMLRERLNGLARELAGVGRDFASGIVD
RPTVAAKANLLTRMLDIDELEAEDGRAIYVQLPNPLFGDRRSARRGEARAASR