Protein Info for Synpcc7942_2269 in Synechococcus elongatus PCC 7942

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 245 transmembrane" amino acids 49 to 74 (26 residues), see Phobius details amino acids 86 to 106 (21 residues), see Phobius details amino acids 112 to 129 (18 residues), see Phobius details amino acids 136 to 159 (24 residues), see Phobius details amino acids 167 to 188 (22 residues), see Phobius details amino acids 198 to 222 (25 residues), see Phobius details PF09991: DUF2232" amino acids 55 to 233 (179 residues), 57 bits, see alignment E=9.6e-20

Best Hits

KEGG orthology group: None (inferred from 100% identity to syf:Synpcc7942_2269)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q31KX0 at UniProt or InterPro

Protein Sequence (245 amino acids)

>Synpcc7942_2269 hypothetical protein (Synechococcus elongatus PCC 7942)
MTAEPAKGPQAEDWDDWVDADPESATALTPAAIAARTEPQGPLALVETAFMASAAALLWL
VNYFFPLGPVLRVLFPLPIALLYRRWGLRSAWLGAIVASLLLFVLLGPTRGILFLLPPGC
LGVLLGCCWQRRLSWGWSILLGGGLETIGFFFRLWVLSVLLGEDIWTYVTAQATGFLEWL
TGVLGWLVQIPLSTVQAVAFAMITLSSLLYILVVHGVAWVLFRRLGTPIPAPPHWLQTVL
DLDAD