Protein Info for Synpcc7942_2132 in Synechococcus elongatus PCC 7942

Name: manB
Annotation: phosphoglucosamine mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 472 PF02878: PGM_PMM_I" amino acids 26 to 155 (130 residues), 146.9 bits, see alignment E=6.3e-47 TIGR01455: phosphoglucosamine mutase" amino acids 27 to 467 (441 residues), 579.6 bits, see alignment E=2e-178 PF02879: PGM_PMM_II" amino acids 179 to 275 (97 residues), 62.8 bits, see alignment E=8.1e-21 PF02880: PGM_PMM_III" amino acids 279 to 392 (114 residues), 116 bits, see alignment E=2e-37 PF00408: PGM_PMM_IV" amino acids 398 to 459 (62 residues), 57.1 bits, see alignment E=3.1e-19

Best Hits

Swiss-Prot: 100% identical to GLMM_SYNP6: Phosphoglucosamine mutase (glmM) from Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)

KEGG orthology group: K03431, phosphoglucosamine mutase [EC: 5.4.2.10] (inferred from 100% identity to syc:syc1960_c)

Predicted SEED Role

"Phosphoglucosamine mutase (EC 5.4.2.10)" in subsystem Sialic Acid Metabolism or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 5.4.2.10)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.4.2.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q31LA7 at UniProt or InterPro

Protein Sequence (472 amino acids)

>Synpcc7942_2132 phosphoglucosamine mutase (Synechococcus elongatus PCC 7942)
MVSATRWETAIEVTPWIAAIAEQVPLFGTDGIRGRVGEHLTAPLAQQVGFWTGQVLRQAG
GDRGPVVVGQDSRNSSNMLAMALSSGLAAAGVEVLHLGLCPTPGVAYLTHHSEAIGGVMI
SASHNPPGDNGIKVFGADGSKLDRQLQAAIEAGLRGQQTSLPATTWGQHYYQPQLADHYQ
AAIAQSLGQRANLQGLKIVLDLAWGAAALLAPRLFRELGAEVIALHDLPDGNQINVNCGS
THLARLQAAVLEQGADMGFAFDGDADRVLAVDGRGRSVDGDHILFLWGRELEQQQQLPGQ
AIVTTVMANLGFERAWQAVGGEFVRTAVGDQYVQAEMQARGAMLGGEQSGHILCRHYALT
GDGTLTAAHVAALVQASGVSLADLVDQSFRPYPQLLRNVRVEDRDRRCNWQNCAALTQAI
AAAETDMGDRGRVLVRASGTEPLLRIMVEAEEAQQVEHWTTHLVQVAESHLL