Protein Info for SMc01791 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 414 transmembrane" amino acids 16 to 38 (23 residues), see Phobius details amino acids 44 to 62 (19 residues), see Phobius details amino acids 69 to 88 (20 residues), see Phobius details amino acids 94 to 114 (21 residues), see Phobius details amino acids 124 to 147 (24 residues), see Phobius details amino acids 168 to 185 (18 residues), see Phobius details amino acids 192 to 208 (17 residues), see Phobius details amino acids 214 to 231 (18 residues), see Phobius details amino acids 242 to 261 (20 residues), see Phobius details amino acids 329 to 353 (25 residues), see Phobius details amino acids 361 to 379 (19 residues), see Phobius details amino acids 385 to 402 (18 residues), see Phobius details PF04932: Wzy_C" amino acids 198 to 338 (141 residues), 47.3 bits, see alignment E=9.8e-17

Best Hits

KEGG orthology group: None (inferred from 100% identity to smk:Sinme_1028)

Predicted SEED Role

"Molybdopterin biosynthesis protein MoeA" in subsystem Molybdenum cofactor biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92QS7 at UniProt or InterPro

Protein Sequence (414 amino acids)

>SMc01791 hypothetical protein (Sinorhizobium meliloti 1021)
MTAVTASRPVILRPQLAAISLVGSCLVTIGVFLSGFVIAEPAPYEVFMAGLIGLWALFGL
RISRATAPLTVLLVLFMIGGILSLTVMADLGTGPMYMAVTGFLCLTAVFFAAIIEESHQR
LPLILNAWVAAAVITALLGILGYFGAIPGAANFTLYDRAKGAFQDPNVFGPFLVAPTLYL
LHGLLTQPISRAPLKIAGLLVLTLGVFLSFSRAAWALDLFCVVAFVFVMLLKQRSGLFRL
RILVLTLSGALFVVAALVVALQSDQVASLFSSRTQLVQDYDGGHLGRFDRHRIGFLMAME
KPLGIGPMVFSTMFPEDEHNVLLKSLTSYGWLGFVAYVALILWTLSLGFRFLLLERPWQP
YLMIAWTTLMGHVGIGNVIDTDHWRHFYLLLGILWGCAALEYRHRRQIRSGTPA