Protein Info for SMc00600 in Sinorhizobium meliloti 1021

Annotation: molybdopterin MPT converting factor subunit 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 86 TIGR01682: molybdopterin converting factor, subunit 1" amino acids 4 to 86 (83 residues), 74.5 bits, see alignment E=4.8e-25 PF02597: ThiS" amino acids 7 to 86 (80 residues), 55.6 bits, see alignment E=3.2e-19

Best Hits

Swiss-Prot: 31% identical to MOAD_HAEIN: Molybdopterin synthase sulfur carrier subunit (moaD) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

KEGG orthology group: K03636, molybdopterin synthase sulfur carrier subunit (inferred from 100% identity to smk:Sinme_0966)

Predicted SEED Role

"Molybdenum cofactor biosynthesis protein MoaD" in subsystem Molybdenum cofactor biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92QX4 at UniProt or InterPro

Protein Sequence (86 amino acids)

>SMc00600 molybdopterin MPT converting factor subunit 1 (Sinorhizobium meliloti 1021)
MSTVNLVYFSWVRERIGRPEETLDLPENVVTIADLLGHLKTRGEEYAAVFEHANVIRAAI
NQEHVEHGEPIAGAREIALFPPMTGG