Protein Info for SMa0151 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 909 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details transmembrane" amino acids 17 to 45 (29 residues), see Phobius details amino acids 48 to 71 (24 residues), see Phobius details amino acids 90 to 115 (26 residues), see Phobius details amino acids 129 to 156 (28 residues), see Phobius details amino acids 167 to 188 (22 residues), see Phobius details amino acids 210 to 234 (25 residues), see Phobius details amino acids 240 to 259 (20 residues), see Phobius details amino acids 279 to 303 (25 residues), see Phobius details amino acids 313 to 343 (31 residues), see Phobius details amino acids 355 to 381 (27 residues), see Phobius details amino acids 398 to 421 (24 residues), see Phobius details PF06808: DctM" amino acids 3 to 416 (414 residues), 313.1 bits, see alignment E=4.2e-97 TIGR00786: TRAP transporter, DctM subunit" amino acids 13 to 422 (410 residues), 333.6 bits, see alignment E=7.4e-104 PF17408: MCD_N" amino acids 514 to 597 (84 residues), 106.7 bits, see alignment E=8.3e-35 PF05292: MCD" amino acids 600 to 846 (247 residues), 359.7 bits, see alignment E=1.5e-111

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SMa0151)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q930W3 at UniProt or InterPro

Protein Sequence (909 amino acids)

>SMa0151 hypothetical protein (Sinorhizobium meliloti 1021)
MIVACLFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFV
LMGAAVASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGI
PEMMRRGYPASVASGSIAAGGTLGILIPPSVTLIVYGIATETSIGRLFMAGILPGILLTI
MFMTWAVIDCKRKGYEFEARLVRYSMKERLAVLPRILPFLLIIAGTLYVLYGGIATPSEA
AGAGAFLTLAVVIVAYRLFRFRPVAGIFGSAMKESVMIMMIMAAAELFAFALSSLFITQT
VAAAIADMEVNRWVLMAVINVFLLICGMFLPPVAVIVMTSPMLFPIVTQAGFDPYWFAIV
LTINMEVGLITPPIGLNLFVINAIAPQIPTKDILWGSLPYVLVMFLAIILLCVFPDVATW
LPNQMLGDRPMNTTSFFSDMLQSIAERGRRFLSLGPARNGDVNPVGTMEALCDTLLSSRG
EASGMALAKNILDRWQGFDQDKRRDFMLALLSRFGPDIERLERAIDAYRADPTPKALLEM
SMAAEPRRQELIRRLNLAPNGIATLVRMRADLLELKAQNPDLEAVDTDFAHLFGSWFNRG
FLVLRPISWSTPADILEKIIRYEAVHHIGGWDELRRRLAPEDRRCFAFFHPQLVDDPLIF
VEVALTREMPPNIADLLKEDRAPIRATDATTAVFYSISNCQEGLRGISFGNFLIKQVVED
LRRDLPRLDTFVTLSPVPGFADWLSRERQAETSNALSAADRSRLAALDEPDWADQPEIAA
AIQPSLTAAAAWYFLRARNRNGKTVDPVARFHLGNGARLERINFLGDRSERAMRQAHGLM
VNYLYKLDDIETNHEAFATRGEVVAAPAIRRLIPADRSSRSLVPGPNVFPPGVRSADAPG
RKGDKEFTS