Protein Info for SM_b21503 in Sinorhizobium meliloti 1021

Annotation: glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 447 PF13439: Glyco_transf_4" amino acids 75 to 224 (150 residues), 45.7 bits, see alignment E=1.5e-15 PF13579: Glyco_trans_4_4" amino acids 78 to 220 (143 residues), 46.7 bits, see alignment E=9.4e-16 PF00534: Glycos_transf_1" amino acids 235 to 378 (144 residues), 106 bits, see alignment E=3.3e-34 PF13692: Glyco_trans_1_4" amino acids 236 to 367 (132 residues), 90.3 bits, see alignment E=2.8e-29

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SM_b21503)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92U10 at UniProt or InterPro

Protein Sequence (447 amino acids)

>SM_b21503 glycosyltransferase (Sinorhizobium meliloti 1021)
MTGKRLLAINNYFYRRGGAEAVFFDHMSMFGEIGWDIVPFAMHHELNEFSPWSDYFVSEI
EYGRRTGLLRKAVQAASVIYSLEAQRNLGRLIDRARPSVAHAHNVYHHLSPAIFSTLKAA
GIPVVMTVHDLKLACPSYKMLRDGRVCEDCRGGRVYNVLRHRCVKGSAPLSAVVLAETVL
HRLLGLYRDKVDRLVVPSRFYLEKLAEWGWPREKMVHIPNFVDVTALSGDWQEGDYFAFA
GRLAPEKGLATLIRAAALSNQRVVIAGTGPEEQTLRSLAAELKADVTFAGYLSGEKLHRL
IGESGALVLPSEWYENAPISVLETYALQRPVIGAAIGGIPEMVKEGETGLLAAPGDAGDL
ARALREMAALSPGERARMGRPPGPGSRANSPPPPTARGRSIFMGKSARPEASHPILIPVP
VTGIQPAQVLGLKELFPRHRRGAAGSL