Protein Info for SM_b21166 in Sinorhizobium meliloti 1021

Updated annotation (from data): Imidazolonepropionase (EC 3.5.2.7)
Rationale: Specifically important for utilizing L-Histidine. Automated validation from mutant phenotype: the predicted function (IMIDAZOLONEPROPIONASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: imidazolonepropionase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 471 transmembrane" amino acids 23 to 47 (25 residues), see Phobius details TIGR01224: imidazolonepropionase" amino acids 89 to 467 (379 residues), 439.3 bits, see alignment E=5.4e-136 PF01979: Amidohydro_1" amino acids 127 to 444 (318 residues), 70.5 bits, see alignment E=1.6e-23 PF07969: Amidohydro_3" amino acids 177 to 445 (269 residues), 63.8 bits, see alignment E=2.2e-21

Best Hits

Swiss-Prot: 100% identical to HUTI_RHIME: Imidazolonepropionase (hutI) from Rhizobium meliloti (strain 1021)

KEGG orthology group: None (inferred from 100% identity to sme:SM_b21166)

MetaCyc: 54% identical to imidazolonepropionase (Pseudomonas fluorescens)
Imidazolonepropionase. [EC: 3.5.2.7]

Predicted SEED Role

"Imidazolonepropionase (EC 3.5.2.7)" in subsystem Histidine Degradation (EC 3.5.2.7)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.2.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See O31196 at UniProt or InterPro

Protein Sequence (471 amino acids)

>SM_b21166 Imidazolonepropionase (EC 3.5.2.7) (Sinorhizobium meliloti 1021)
MPGGVAGARSQRPPPMPILFPCFWPAAPIALSHGSYFSLVIAGIMYIHYWRRRAAPMDGN
ENPNPARTSLWRNARLATLREELGPLGIIEDGVIAVRGERIVYAGPEAGLPSELARADQV
FDCEGRWVTPALIDCHTHIVHGGNRAREFQLRLEGATYEEIARAGGGIASTVEATNALSV
EALVEAALPRLDTLLAEGVSTVEVKSGYGLNVEAELKMLRAARRLESLRPVRIVTSYLAA
HATPPEFRGRNGDYIAEVVLPGLTAAHAEGLADAVDGFCEGIAFSPAEIASVFGRAKSLG
LPVKLHAEQLSDLGGAKLAASYGALSADHLEYLDAAGAAAMAKAGTVAVLLPGAFYTLRE
KQLPPVEALREAGTRIAIATDCNPGTSPLTSLLLTLNMSATLFRLTLEECLAGVTREAAR
ALGILGETGTIEAGKSADLAIWNIDQPAELIYRIGFNPLRERIFKGERILR