Protein Info for SM_b20973 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1008 PF01636: APH" amino acids 34 to 263 (230 residues), 97.6 bits, see alignment E=1.5e-31 PF01551: Peptidase_M23" amino acids 432 to 530 (99 residues), 60.4 bits, see alignment E=2.3e-20 PF00202: Aminotran_3" amino acids 600 to 1002 (403 residues), 226.9 bits, see alignment E=5.7e-71

Best Hits

KEGG orthology group: K00837, [EC: 2.6.1.-] (inferred from 100% identity to sme:SM_b20973)

Predicted SEED Role

"aminotransferase, class III"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.6.1.-

Use Curated BLAST to search for 2.6.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92UM7 at UniProt or InterPro

Protein Sequence (1008 amino acids)

>SM_b20973 hypothetical protein (Sinorhizobium meliloti 1021)
MTTSEFKNVQGIAAIEALLAAEYGIAGEILALPGEHDLNFRIQASDGRAFLLKLHALGAP
EELDMQIAVLDHLAREATELPVAKVLPSRSGASFTRVEFNGERVARLLTWLPGETWARAA
NRSSNSVETLGALLGKLDRSLAGFSHPGARREYAWDIARAEMHLANVDLIEGMEKRRAVR
AILEHFVSTVLPRLKACPRQVIHNDANDYNVLVGADGCVSGLLDFGDMVESNRVVEVAVA
SAYALIGSPDPIGAIARLAGGYHGVNPLGETEAELIFDLVRTRYAVSMCMAARQIRDNPE
NTYLLVSQEDVWRELRRLEQENRPLAIARLRDACGFAPIPKAARVVRWLESNAHEFSGVI
KPGIARPKPAVFDFSANSSETWAGLDKDVAQARIEAHIHAEGADFGLGLYGEDRAVYKGD
AYQATTSLRRTIHLGIDLFAPANEPVHAPFAGKVAFYHDDAVPYGFGPTILLEHRTGEGD
AFWTLYGHLSRESASRLSIGQPVARGEAFAAMGNRAENGGWVPHLHFQIVTDYLGLEGRM
HGVGVKEQWQVWREISPDPSVVLGLSVPASVIVERDKAFLVRERQRRIGRSLSIAYGSAP
LKIVAGEGAYLIDDEGTRWLDMVNNVCHVGHCHPRVVKAAQMQMARLNTNSRYLHDSLVE
YSRRLAALFPDPLNVCFFVNSGSEANDLAIRLARAYTGNRDVITVDHAYHGHLTSLIDVS
PYKFAGKGGEGRPAHVRVAEMPDLYRGRYRYGDTDVGRKYAEDVKRQIDALAAEGRKPAL
FFSEGILGTGGQLVLPEGYLRGAYAHVRAAGGLCLADEVQVGFGRVGSHMWAHETQGVVP
DIVTMGKPIGNGHPMAAVVTTEAIAAAFANGMEYFNTFGGNPVSAEIGLAVLDIIRDERL
MHHCAVVGNRLMDGARELASRHTIIGDVRGYGLFNGIELVRDRDTLEPAAAELDFVIAEM
KDRHRILLSSEGPQHNVLKIKPPAPFSADDCDRFLEALDAVLAQVKAA