Protein Info for SM_b20079 in Sinorhizobium meliloti 1021

Annotation: hemolysin-adenlyate cyclase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1072 PF00353: HemolysinCabind" amino acids 6 to 36 (31 residues), 15.1 bits, see alignment (E = 1.9e-06) amino acids 24 to 50 (27 residues), 20.7 bits, see alignment (E = 3.3e-08) amino acids 87 to 121 (35 residues), 36.5 bits, see alignment (E = 3.7e-13) amino acids 160 to 195 (36 residues), 30 bits, see alignment (E = 4e-11) amino acids 182 to 212 (31 residues), 23.4 bits, see alignment (E = 4.6e-09) amino acids 248 to 275 (28 residues), 15.9 bits, see alignment (E = 1.1e-06) amino acids 261 to 294 (34 residues), 28.8 bits, see alignment (E = 9.9e-11) amino acids 334 to 367 (34 residues), 20.3 bits, see alignment (E = 4.6e-08) amino acids 406 to 440 (35 residues), 24.5 bits, see alignment (E = 2.2e-09) amino acids 479 to 503 (25 residues), 14.2 bits, see alignment (E = 3.7e-06) amino acids 541 to 569 (29 residues), 20.7 bits, see alignment (E = 3.4e-08) amino acids 552 to 586 (35 residues), 24.5 bits, see alignment (E = 2.1e-09) amino acids 625 to 660 (36 residues), 25.4 bits, see alignment (E = 1.1e-09) amino acids 708 to 741 (34 residues), 25.3 bits, see alignment (E = 1.2e-09) amino acids 782 to 814 (33 residues), 20.9 bits, see alignment (E = 2.9e-08) amino acids 851 to 865 (15 residues), 9.3 bits, see alignment (E = 0.00012) amino acids 862 to 896 (35 residues), 21.5 bits, see alignment (E = 1.9e-08) amino acids 935 to 969 (35 residues), 28.8 bits, see alignment (E = 9.6e-11)

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SM_b20079)

Predicted SEED Role

"FIG01074567: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92X83 at UniProt or InterPro

Protein Sequence (1072 amino acids)

>SM_b20079 hemolysin-adenlyate cyclase (Sinorhizobium meliloti 1021)
MAVINGTAGNNVLIGTDLDDVISGFGGDDFIQGLGGADVINGGAGVDTVDYSEKTTSVVV
TLTGANAATVFVNGVADDTLSNVENVYGGSGNDTITGDAQNNLFRGGGGNDVLDGGAGND
TADYADKTTSVVVTLMGATPATVFVNGIAEDTISNFENVYGGSGNDILTGDDRSNILRGE
AGNDILNGGADDDLLSGGAGNDTADGGTGIDTFDLREKTSSVVVQLSGANAATVFVGGVA
EDTIRNVENIVGGTADDTLSGDAAANKLSGARGNDWLKGGGGADTLDGGEDSDTADYSDK
AAAIAVALNGGNPVTVTVGGIAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLD
GGGGSDTADFSDKVQSVVLALNGAVDAIAAVGGTAEDTVRNIENITGGSGNDQFTGDAAA
NTFRGGLGADVLDGGDGSDTADYGDKTVSVVVTLAGANPTTAFVDGMAEDSLRNIENIIG
GSGNDVLAGDGFQNVLDGGAGTDMADYSASAKGIAVMLNGANDAKVIVGSAAEDTLRNIE
NVTGSAFADVITGDAQANILLGGSGSDILKGDGGQDVIDGGAGTDTADFSEKTAAVVLAL
AGAANAIATVGGLAEDTVRNIESIFGGIGADVLTGDGNSNTIRGGAGADSLDGGAGVDTV
DYRDKTKSVAVTLDGATPVTVKVGGVIEDTIRNFENISGGSAGDMLTGDGLANVLVGNDG
ADTLRGGLGKDVLDGGNGVDTADYLEKTDAISVTLNGTASAAVLVGGTAEDTIRGVENIL
SGSGADTLVGDTASNMFRGALGADFIDGGAGVDTADYREKTGSVEVALSGASDSFVFVGG
VVEDTIRNIENVFGGKGNDTLTGDGLANTLNGNDGKDLLTGGGGADILDGGAASDTASYR
DKTASVSVTLDGATYTTVTVGGAAEDTIRNVENIWGGTGNDSLSGDANANLLSGGGGSDI
LFGGAGADIFQFDFALGSTNVDTVLDFTAGDRLFLSKSIFTSLSGGTLAATQFYAAADAT
AAQNVNQKIIYDTTSGALYYDADGSLSGHTAVQFAVFSTHPGLTAGDFVLVV