Protein Info for Rv1322A in Mycobacterium tuberculosis H37Rv

Annotation: Conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 152 PF00903: Glyoxalase" amino acids 20 to 147 (128 residues), 66.4 bits, see alignment E=5e-22 TIGR03081: methylmalonyl-CoA epimerase" amino acids 21 to 149 (129 residues), 126.7 bits, see alignment E=4.2e-41 PF13468: Glyoxalase_3" amino acids 21 to 128 (108 residues), 39.6 bits, see alignment E=8.5e-14 PF13669: Glyoxalase_4" amino acids 22 to 134 (113 residues), 75.6 bits, see alignment E=5.7e-25

Best Hits

KEGG orthology group: None (inferred from 100% identity to mtf:TBFG_11354)

MetaCyc: 41% identical to methylmalonyl CoA epimerase subunit (Propionibacterium freudenreichii shermanii)
Methylmalonyl-CoA epimerase. [EC: 5.1.99.1]

Predicted SEED Role

"Methylmalonyl-CoA epimerase (EC 5.1.99.1); Ethylmalonyl-CoA epimerase" (EC 5.1.99.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.1.99.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (152 amino acids)

>Rv1322A Conserved protein (Mycobacterium tuberculosis H37Rv)
VMTTDQVHARHMLATSLVTGLDHVGIAVADLDVAIEWYHDHLGMILVHEEINDDQGIREA
LLAVPGSAAQIQLMAPLDESSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVY
ETARRGTANSRINFIHPKDAGGVLIELVEPAP