Protein Info for RR42_RS36135 in Cupriavidus basilensis FW507-4G11

Annotation: ATPase AAA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 306 PF07726: AAA_3" amino acids 41 to 171 (131 residues), 207.7 bits, see alignment E=1e-65 PF07728: AAA_5" amino acids 42 to 169 (128 residues), 47.5 bits, see alignment E=3.9e-16 PF00004: AAA" amino acids 47 to 170 (124 residues), 34.5 bits, see alignment E=5.4e-12 PF17863: AAA_lid_2" amino acids 230 to 286 (57 residues), 71.8 bits, see alignment E=6.3e-24

Best Hits

KEGG orthology group: K03924, MoxR-like ATPase [EC: 3.6.3.-] (inferred from 86% identity to cti:RALTA_B0175)

Predicted SEED Role

"FIG022979: MoxR-like ATPases"

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.-

Use Curated BLAST to search for 3.6.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YG28 at UniProt or InterPro

Protein Sequence (306 amino acids)

>RR42_RS36135 ATPase AAA (Cupriavidus basilensis FW507-4G11)
MTARPRIVASLSEAEAQLGRIVLGKPRQIRLALACMLARGHLLLEDLPGVGKTTLAHALA
RTLGLQFQRVQFTSDLLPADLIGVSVFVRDSAEFRFHRGPVFAQVVLADEINRATPKTQS
ALLEAMAEGQVTHDGVTHALPSPFFVIATQNPLDQIGTHALPESQLDRFTMRLSLGYPDP
AFERVLYLGGAAPAAGTPVMDAEQVAALQQAAAQVYAGPALVDYALALVQATRAHSAFAA
GLSPRAGLALLACARAWALLHQRDSVLPEDVQAVFMPVAGHRLLPSGAAGGGQEALTRLL
ADVAIP