Protein Info for RR42_RS30325 in Cupriavidus basilensis FW507-4G11
Annotation: FMN reductase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 66% identical to SFNE_PSEPU: NADH-dependent FMN reductase SfnE (sfnE) from Pseudomonas putida
KEGG orthology group: K00299, FMN reductase [EC: 1.5.1.29] (inferred from 75% identity to cti:RALTA_B1390)Predicted SEED Role
"FMN reductase (EC 1.5.1.29)" in subsystem Alkanesulfonate assimilation or Alkanesulfonates Utilization (EC 1.5.1.29)
MetaCyc Pathways
- two-component alkanesulfonate monooxygenase (2/2 steps found)
- adenosylcobalamin biosynthesis II (aerobic) (24/33 steps found)
- 5,6-dimethylbenzimidazole biosynthesis I (aerobic) (2/3 steps found)
- bacterial bioluminescence (5/8 steps found)
- dibenzothiophene desulfurization (1/5 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.5.1.29
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A0C4YSI0 at UniProt or InterPro
Protein Sequence (188 amino acids)
>RR42_RS30325 FMN reductase (Cupriavidus basilensis FW507-4G11) MATPLKVVAVNGSAQQPSRTLALVQALLTELDSRLHLQSHIVNLGDIARPLGAALSRAEL PAEIENQLVAIESADLLVVAAPVYRGSYPGHFKHLFDLVGQQALVDKPVLLGATGGSDRH ALVLEHQLRPLFGFLQALTLPIGVYGSPGDFHNYQVSSAALAERIRLAADRCAPLFEASR KLPLQRAA