Protein Info for RR42_RS30175 in Cupriavidus basilensis FW507-4G11

Annotation: beta-glucosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 708 PF00933: Glyco_hydro_3" amino acids 66 to 310 (245 residues), 99.1 bits, see alignment E=5.5e-32 PF01915: Glyco_hydro_3_C" amino acids 343 to 591 (249 residues), 190.4 bits, see alignment E=5.8e-60 PF14310: Fn3-like" amino acids 623 to 690 (68 residues), 55.8 bits, see alignment E=6.1e-19

Best Hits

KEGG orthology group: K05349, beta-glucosidase [EC: 3.2.1.21] (inferred from 70% identity to bam:Bamb_3266)

Predicted SEED Role

"Beta-glucosidase (EC 3.2.1.21)" in subsystem Beta-Glucoside Metabolism or Fructooligosaccharides(FOS) and Raffinose Utilization (EC 3.2.1.21)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.21

Use Curated BLAST to search for 3.2.1.21

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YNA8 at UniProt or InterPro

Protein Sequence (708 amino acids)

>RR42_RS30175 beta-glucosidase (Cupriavidus basilensis FW507-4G11)
MPSSSSVAAGRDPDALARDTEARMTDDERFSMLYSLMVRVFGTSAREPRVPADVPAVAGY
VKGVPRLGIPPLKLADASLGLRHTDGPDDCATALPAGLAIGATFNPSLARTIGNLIGKEA
RARDFNVALGGGINLVRDVRNGRNFEYISEDPLLSGLIGAEIVSGTQEEGVIAVLKHVSL
NASETNKFFLDAIIDPAAHRESDLLAFQIAIEKSQPGALMGAYNLVNGAYACGNRAILQE
TIKDAMGFKGWVMSDWLAVYGWEFALSGLDQHAGAQLDKQEWFNGPLRQAYEQGKVPKER
ISDMVRRMLRSYYAIGIDQQRAAAPVDFAAHNAVALQAAREGIVLLKNEGQALPLAAGRQ
RIAIIGGYAQTGVLSGDGSSQVMPTSGYAAQVPLRSHPLLGTTVMRLFGSSPLAALRKQL
PEAIIEFDCGAHIADAVAMAKRADIVVMFAYRHEAERFDSPDMTLPFGQDALIEAVANEN
RNLIVVLQTGNPVAMPWRDKARAIVQAWFPGQLGAQAIAEVLTGKINPSGRLPISFPFDV
GQTPHPTLPGSDVELGTPIKVHYHEGAEVGYRWFAKTGRQPLFGFGHGLSYATFAYRDLE
VVDAESLTVAFTVTNTGARQGDDVPQVYLTDAAGDWRMRLLGFERVSLRPGESARVRITA
DPRLLACFQSELGCWRMEAGQYRIALGRSAQDLELSIELCLEEREFGR