Protein Info for RR42_RS24530 in Cupriavidus basilensis FW507-4G11

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 266 signal peptide" amino acids 1 to 39 (39 residues), see Phobius details PF02374: ArsA_ATPase" amino acids 3 to 127 (125 residues), 35 bits, see alignment E=3.4e-12 PF06564: CBP_BcsQ" amino acids 3 to 140 (138 residues), 23.4 bits, see alignment E=1.4e-08 PF10609: ParA" amino acids 5 to 47 (43 residues), 31.9 bits, see alignment 3.3e-11 PF13614: AAA_31" amino acids 5 to 157 (153 residues), 82.1 bits, see alignment E=1.7e-26 PF01656: CbiA" amino acids 6 to 123 (118 residues), 53.6 bits, see alignment E=7.7e-18

Best Hits

KEGG orthology group: None (inferred from 49% identity to mmt:Metme_1932)

Predicted SEED Role

"Chromosome (plasmid) partitioning protein ParA" in subsystem Bacterial Cytoskeleton or Plasmid replication or Two cell division clusters relating to chromosome partitioning

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YK58 at UniProt or InterPro

Protein Sequence (266 amino acids)

>RR42_RS24530 hypothetical protein (Cupriavidus basilensis FW507-4G11)
MIKFCMLSTKGGVGKTTLAASLGGLLADMGLRVLLIDADIQPSLSKYYPLSHQAPKGLTY
VIDHGAITQECISHTEIDGLDIILSDDPEGAIQHKLATRADGMFRLSRALASPIMSDDNY
DVVIIDTQGAAGHLQNNAALAASQIILPVVPETLAAREFTTGTMELLERLEVGPEFGFRL
GPVRAVLYKQSRTADAKHVAQALREDFIPMGGRVTLLNTPVPLAKAYTEASTKRIPVHRH
ETRHPGTMKSASQVMHELVWELIPSL