Protein Info for RR42_RS23670 in Cupriavidus basilensis FW507-4G11

Annotation: DSBA oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 495 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 38 to 56 (19 residues), see Phobius details amino acids 68 to 87 (20 residues), see Phobius details amino acids 93 to 117 (25 residues), see Phobius details amino acids 129 to 150 (22 residues), see Phobius details amino acids 156 to 176 (21 residues), see Phobius details amino acids 188 to 208 (21 residues), see Phobius details amino acids 219 to 237 (19 residues), see Phobius details amino acids 257 to 278 (22 residues), see Phobius details amino acids 293 to 312 (20 residues), see Phobius details amino acids 324 to 342 (19 residues), see Phobius details amino acids 348 to 371 (24 residues), see Phobius details amino acids 389 to 411 (23 residues), see Phobius details amino acids 456 to 477 (22 residues), see Phobius details PF07690: MFS_1" amino acids 7 to 399 (393 residues), 179 bits, see alignment E=2e-56 PF06609: TRI12" amino acids 21 to 401 (381 residues), 23.8 bits, see alignment E=2.3e-09 PF00083: Sugar_tr" amino acids 38 to 171 (134 residues), 59.3 bits, see alignment E=5e-20

Best Hits

KEGG orthology group: None (inferred from 80% identity to rme:Rmet_5244)

Predicted SEED Role

"FIG00975267: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YJV1 at UniProt or InterPro

Protein Sequence (495 amino acids)

>RR42_RS23670 DSBA oxidoreductase (Cupriavidus basilensis FW507-4G11)
MQIIFGLMLAILLGALEQSIVAVVLPEIALQLNGFEEMAWVVSAYLVASTVVTPIYGKLS
DLLGRRSVLSFAIVLFFLASIACALAQTMPQLIIARVLQGLGGGGLISVSQATIADVVPL
RDRGRYQGYVSGVWAVASMAGPVIGGYLAHYLSWRWIFWINLPLALLALLVVRRALKHLP
AGGRRHRIDYVGALLFGGGLTGVLVFLTRLGQGQSAATPQTLGLLVAGMAAMVLFVWQER
RVADPMIPLDMLRVPTVTICCITLFLCFFQLIAMSVLLPLRFQVVGGVQADSAALRLVPL
TLSIPFGAFISGRLMTWSGRYKPLQLAGSLVAPLAIVALAFVDPHAVLLTALVMVMLGLA
IGLQLPSGLVATQNAVPAHQVGVATALTAFSRMLGGAVGVAVLTTVLIALLRHGGMGIAD
LAGGEDILMSMFHRAMAGGDAGTSADAGAVRAAAEVAFRTLFLLSAAVSLVAPFLVARLP
EATLRGSTSVAASMD