Protein Info for RR42_RS15745 in Cupriavidus basilensis FW507-4G11

Annotation: group1 glycosyl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 411 PF00534: Glycos_transf_1" amino acids 231 to 386 (156 residues), 39.7 bits, see alignment E=3.8e-14 PF13692: Glyco_trans_1_4" amino acids 236 to 375 (140 residues), 43.5 bits, see alignment E=4e-15

Best Hits

KEGG orthology group: None (inferred from 87% identity to rpf:Rpic12D_0594)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YIP7 at UniProt or InterPro

Protein Sequence (411 amino acids)

>RR42_RS15745 group1 glycosyl transferase (Cupriavidus basilensis FW507-4G11)
MKVWIVNPYGSLPGEAWREYRSSMLAEAFARAGHEVTWWLSNFEHRSKKFRSEGYSEQRL
DTGVNVRIVPTTPYSSHVSVARIRSERTFARNLAQRVQANPQDKADMIVLAEPSIFYGKY
IVETARSIGAKLVADIIDIWPEVFAMILPKPLRAFDRVLLAPLYLRRAAILRACDGIVGV
SEDYRDIGVRSAPAVPSAVSYWGVDVAAMRAAMANENGGVLRKLGLGDKKPGEVWVIYAG
TLGAGYDMESILKAARSERLRGKPVKFLFAGDGPQRPLLESACAEPGGNVVYLGRLDPDD
LNLMYKYCDIGLSTYLAHSTVSMPIKFYDYLAAGVATVNSLEREIQRLIASHQLGRQYVP
GDADSLAAAIEALAGDRALLDTCKANSASLAPRFDQYLQHDAFVRFAETLR