Protein Info for RR42_RS15200 in Cupriavidus basilensis FW507-4G11

Annotation: phenazine biosynthesis protein PhzC/PhzF

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 286 TIGR00654: phenazine biosynthesis protein, PhzF family" amino acids 4 to 278 (275 residues), 165.4 bits, see alignment E=1e-52 PF02567: PhzC-PhzF" amino acids 10 to 275 (266 residues), 167.3 bits, see alignment E=2.8e-53

Best Hits

KEGG orthology group: K06998, (no description) (inferred from 81% identity to reu:Reut_A0837)

Predicted SEED Role

"Phenazine biosynthesis protein PhzF" in subsystem Phenazine biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YC08 at UniProt or InterPro

Protein Sequence (286 amino acids)

>RR42_RS15200 phenazine biosynthesis protein PhzC/PhzF (Cupriavidus basilensis FW507-4G11)
MTTYAFRLLNVFAESTFGGNPLCVFEDARGLDTATMQALALQFNLSETTFILPSEQASAH
VRIFTTGYEMPFAGHPTLGTAHVVRDLAATGDALTLAFKAGVVPVTAQGDVWTFTAPHAG
APRTAPAGLPDAQMASLLGLAETDLLAAPIWVDTGADQLMVPVKSVDAVRRAQPDSARLA
SWPQSSLGRKTAYVFAFDPTRPGQVVSRYFFTKQGGGVAEDPGTGSACANLGGWLIANDH
ALPAAYQVAQGEAVDRPCTLRLEVTGEQAIRVGGRVIELGRGTINL