Protein Info for RR42_RS14755 in Cupriavidus basilensis FW507-4G11

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 208 PF04751: DUF615" amino acids 34 to 186 (153 residues), 182.2 bits, see alignment E=3e-58

Best Hits

Swiss-Prot: 74% identical to Y2571_CUPMC: UPF0307 protein Rmet_2571 (Rmet_2571) from Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)

KEGG orthology group: K09889, ribosome-associated protein (inferred from 74% identity to rme:Rmet_2571)

Predicted SEED Role

"FIG138315: Putative alpha helix protein" in subsystem Putative TldE-TldD proteolytic complex

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YBX4 at UniProt or InterPro

Protein Sequence (208 amino acids)

>RR42_RS14755 hypothetical protein (Cupriavidus basilensis FW507-4G11)
MPTMTRNTRPSPRNASGFPDPFTPEPADDDDMLKSKSQKKRDMLALQDLGVELEALPKDR
LARVPMPEALADAIRDARRITNHEGKRRQMQYVGKVMRRLDDDEVAAIQRVLEGFKGTSK
AETAKLHLVERWRELLLADDAALTKFLAEHPASDVQALRNIIRNARKEHEMNKPPRYFRE
LFQAIKTALESKQATAAGEQEPEPEAGE