Protein Info for RR42_RS14605 in Cupriavidus basilensis FW507-4G11

Annotation: threonine transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 217 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 42 to 64 (23 residues), see Phobius details amino acids 66 to 91 (26 residues), see Phobius details amino acids 122 to 143 (22 residues), see Phobius details amino acids 156 to 183 (28 residues), see Phobius details amino acids 193 to 212 (20 residues), see Phobius details PF01810: LysE" amino acids 20 to 211 (192 residues), 92.8 bits, see alignment E=1e-30

Best Hits

KEGG orthology group: None (inferred from 65% identity to reh:H16_A2664)

Predicted SEED Role

"Putative threonine efflux protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YBN9 at UniProt or InterPro

Protein Sequence (217 amino acids)

>RR42_RS14605 threonine transporter (Cupriavidus basilensis FW507-4G11)
MLHILPGGHVLAAFLLSSLLLAVTPGPAVIYIVARTLSLGRLAGLASVTAVVLGNLVNVL
AAALGLAALFAVSSLAFAVMKYAGAAYLVYLGVRALRARPAAAAQADPAAGSAGLRRVFR
DGFVVALFNPKTTLFFAAFLPQFMDPAIAALPQSVALGGTFVLIAATTDCCYVLAAAALL
PLLARARGAQAVGRYLTGGALIGLGVLAAVSGGRNSK