Protein Info for RR42_RS11515 in Cupriavidus basilensis FW507-4G11

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 336 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details TIGR03866: PQQ-dependent catabolism-associated beta-propeller protein" amino acids 33 to 334 (302 residues), 326.1 bits, see alignment E=2e-101 PF10282: Lactonase" amino acids 69 to 181 (113 residues), 31.4 bits, see alignment E=4.3e-11 amino acids 189 to 317 (129 residues), 35 bits, see alignment E=3.5e-12 TIGR02276: 40-residue YVTN family beta-propeller repeat" amino acids 160 to 199 (40 residues), 41 bits, see alignment 1.4e-14 amino acids 295 to 335 (41 residues), 38.2 bits, see alignment 1.1e-13

Best Hits

KEGG orthology group: None (inferred from 80% identity to reh:H16_B1042)

Predicted SEED Role

"FIG00443700: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4Y3F3 at UniProt or InterPro

Protein Sequence (336 amino acids)

>RR42_RS11515 hypothetical protein (Cupriavidus basilensis FW507-4G11)
MNKPPTLGFIACATVAAMLLLIAAGVAGAAESRNATGQVFVSSEKDDAVAAYSAASRQLI
AVWRQCKRPRHLQLSPDRRRLYVACSDDSRVDVVDVASRKTVASLPVGDDPELFDLSPDG
RTLYVSNEEDGLLSAYDIASGKKVFAIKVGEEPEGVKASPDGKRVYVTSEVANLVHVIDV
ASRKLVRNIQVGNRPRRLLLAMDGKELWVTNELAASVSVIRTDTLEVVQTIAFAPKGLRA
EDVTPVGLVASSDGKRAYIGLGRANHVAVVDVASRRVLDYVLVGRRAWGLALTRDNALLY
VANGLSDDVSVVDTASNKAVTTLKAGRVPHSVAIDD