Protein Info for RR42_RS09265 in Cupriavidus basilensis FW507-4G11

Annotation: NUDIX hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 568 PF00753: Lactamase_B" amino acids 313 to 480 (168 residues), 70.8 bits, see alignment E=2.3e-23 PF17778: BLACT_WH" amino acids 518 to 560 (43 residues), 47 bits, see alignment 3.1e-16

Best Hits

KEGG orthology group: None (inferred from 73% identity to reu:Reut_B4249)

Predicted SEED Role

"FIG00974684: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4Y8I2 at UniProt or InterPro

Protein Sequence (568 amino acids)

>RR42_RS09265 NUDIX hydrolase (Cupriavidus basilensis FW507-4G11)
MREQEQSGSPPPSRPPSLRQAASILVVRDGAAGMEVLLVRRAERNDDRSSGAFVFPGGTL
DPQDKTLHEACAGLDDAAASARLKLPDGGLDFYLAAVRECFEEAGLLFASDAGGELIALD
TLDATQQAWLRQSARRGGPGMAQLCERLGVRLAVDRLAYHSHWLTPPGLPKRFDTRFFVA
MAPAGQSATHDGDEAVEHLWIRPGDAIDPARGLKLVAVTRRTLASIARFDTAQACFDHAA
QLRDIARIMPRLAQGSGGLRPVLPSEPAYAEIERIDPLGQGHARYELATGAAVRLSERIW
RVTAGNGSVMTGPGTNTYFVGDPARNEWAVIDPGPDDEAHVDAVLAAAPGPIRWILATHT
HIDHSPATSSLKAATGAPVLGRPAPQTPRQDQTFQPERILAHGERLALGEGCTLRVVHTP
GHASNHLCFLLEEEKTLFTGDHVMQGSTVVINPPDGDMHAYLASLAALQDEDLEWLAPGH
GFLMPRPADAIRTLIRHRMQREAKVLNALRELGETGIDALLLRVYDDVPQRMLPVAKRSL
LAHLLKLAHDGRVQESDEKWQVLKRAAD