Protein Info for RR42_RS09070 in Cupriavidus basilensis FW507-4G11

Annotation: carbohydrate kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 541 TIGR00197: YjeF family N-terminal domain" amino acids 45 to 239 (195 residues), 89.9 bits, see alignment E=1.8e-29 PF03853: YjeF_N" amino acids 54 to 219 (166 residues), 122.2 bits, see alignment E=3.4e-39 TIGR00196: YjeF family C-terminal domain" amino acids 259 to 525 (267 residues), 187 bits, see alignment E=4.6e-59 PF01256: Carb_kinase" amino acids 277 to 513 (237 residues), 175.4 bits, see alignment E=2.1e-55 PF08543: Phos_pyr_kin" amino acids 380 to 500 (121 residues), 28.9 bits, see alignment E=1.1e-10

Best Hits

KEGG orthology group: None (inferred from 69% identity to reu:Reut_A1387)

Predicted SEED Role

"NAD(P)HX epimerase / NAD(P)HX dehydratase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4Y288 at UniProt or InterPro

Protein Sequence (541 amino acids)

>RR42_RS09070 carbohydrate kinase (Cupriavidus basilensis FW507-4G11)
MQSSAPTSPTLAAALPDDAWLPLDAASASAIPLYDVASVRHIEAAALASLPAFALMSRAG
AAAAAWLAHHAPAGPLLLLAGPGNNGGDALVAATRLHQAGRQVQVWLTAEPDRLPADAAR
AWLEARAAGVILHAMPESACHGTLPPFPPDTCALVDGLFGIGLNRAADGFTAQWIAHLAE
SRLPVFSLDIPSGLFADTGAGAPAVRALRTLTFIGAKPGLLTLDGRDCAGEVDIAPLGLL
YPPAQSACATVSVPASFASALPARRHATNKGTFGSLAVIGGGIGMTGAPLLGARAAQHLG
AGRVHIAFLAQPAPLIDPVHPELMLHPIAEIELTNMSALVIGPGMGTGTAARKQLAQLLQ
ASVAATEPPALVLDADALNLLAADPALAAMLGGGPPVRVMTPHPLEAARLSGISVAEIQR
DRLAAARSLAAQWQAVVVLKGSGTVIASPPDALGSVSLSINPTGNAGLATAGTGDVLAGM
IGALLAQGMPALQAAQAAVWLHGRAADHLVAQGTGPAGLTASELYLPVRDLFNALLRARQ
A