Protein Info for RR42_RS03840 in Cupriavidus basilensis FW507-4G11

Annotation: molybdate ABC transporter substrate-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 263 signal peptide" amino acids 1 to 36 (36 residues), see Phobius details PF13531: SBP_bac_11" amino acids 38 to 260 (223 residues), 205.6 bits, see alignment E=2.8e-64 TIGR01256: molybdate ABC transporter, periplasmic molybdate-binding protein" amino acids 43 to 259 (217 residues), 198 bits, see alignment E=9.8e-63 PF01547: SBP_bac_1" amino acids 43 to 253 (211 residues), 79.5 bits, see alignment E=1.4e-25 PF04069: OpuAC" amino acids 65 to 212 (148 residues), 25.6 bits, see alignment E=2.7e-09 PF12974: Phosphonate-bd" amino acids 96 to 260 (165 residues), 39.5 bits, see alignment E=1.4e-13 PF13343: SBP_bac_6" amino acids 136 to 260 (125 residues), 25.4 bits, see alignment E=2.8e-09

Best Hits

KEGG orthology group: K02020, molybdate transport system substrate-binding protein (inferred from 78% identity to reu:Reut_A0634)

Predicted SEED Role

"Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)" in subsystem Molybdenum cofactor biosynthesis or Transport of Molybdenum (TC 3.A.1.8.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4Y7T2 at UniProt or InterPro

Protein Sequence (263 amino acids)

>RR42_RS03840 molybdate ABC transporter substrate-binding protein (Cupriavidus basilensis FW507-4G11)
MPAQSRQPRGARRASLAAGLLLSATLALSAPAAFGADLVVSAAASLTNAFKSLAESYERA
HPQTKVILNFGASDVLMQQIVNGAPADVFASADQDAMNKAVAERVVQPASRRDFAANQLA
LILPADSKLDVGKLQDLARPEFKRVAFGNPASVPVGRYTKGALEGAGVWDAVSAKGVMAQ
NVRQSLDYVARGEVDAGFVFATDAAIMPDKVKVALRVPTRQPVTYPIAITSHTRQPEQAA
AFLGYVSSPEGQAVLARYGFLKP