Protein Info for RR42_RS00865 in Cupriavidus basilensis FW507-4G11

Annotation: phenylacetic acid degradation protein PaaI

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 152 TIGR00369: uncharacterized domain 1" amino acids 27 to 129 (103 residues), 65.4 bits, see alignment E=2.4e-22 PF03061: 4HBT" amino acids 57 to 130 (74 residues), 49.3 bits, see alignment E=2.5e-17

Best Hits

KEGG orthology group: None (inferred from 85% identity to reu:Reut_A0134)

Predicted SEED Role

"Phenylacetic acid degradation protein PaaD, thioesterase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4XYN2 at UniProt or InterPro

Protein Sequence (152 amino acids)

>RR42_RS00865 phenylacetic acid degradation protein PaaI (Cupriavidus basilensis FW507-4G11)
MPQAVDATPLSAERADAIATSFSRQGLMTTFGAALTRVMRGEVEIAMPWSEGVTQQHGFF
HGGAVGALADSACGYAALSIVGDGEAGLTAEYKINLLSPAQGERLVAVGRVLKPGRTLIV
AQGDVYSETAGVRKAVATMLMTLCVVRTLDHV