Protein Info for RR42_RS00360 in Cupriavidus basilensis FW507-4G11

Annotation: Asp/Glu/hydantoin racemase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 245 PF01177: Asp_Glu_race" amino acids 3 to 208 (206 residues), 140 bits, see alignment E=5.1e-45

Best Hits

KEGG orthology group: None (inferred from 91% identity to rpi:Rpic_4023)

Predicted SEED Role

"Hydantoin racemase (EC 5.1.99.-)" in subsystem Hydantoin metabolism (EC 5.1.99.-)

Isozymes

Compare fitness of predicted isozymes for: 5.1.99.-

Use Curated BLAST to search for 5.1.99.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YAF2 at UniProt or InterPro

Protein Sequence (245 amino acids)

>RR42_RS00360 Asp/Glu/hydantoin racemase (Cupriavidus basilensis FW507-4G11)
MRILVVNPNISESVTELIHAEALRTASPGTALTMATAQFGVAYIETRFEALVGGYATACV
AAEHQGQFDGLVVAAFGDPGLAGLKELFNVPVVGMTEAALASACLLGQRFSIIAISHRIE
AWYRECVAANGLASRLASVRSLQQPLRDIGSVQEDHAARLEELSLKAVHEDGADVIIVAG
APLAGLARTLKDRIPVPVVDGVSSAIRHCESLIALAPTGAAQGSFARPPRKPNHGLPPTL
AAMLD