Protein Info for RALBFv3_RS23130 in Ralstonia solanacearum IBSBF1503

Annotation: CusA/CzcA family heavy metal efflux RND transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1052 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 335 to 355 (21 residues), see Phobius details amino acids 362 to 382 (21 residues), see Phobius details amino acids 388 to 407 (20 residues), see Phobius details amino acids 449 to 470 (22 residues), see Phobius details amino acids 487 to 510 (24 residues), see Phobius details amino acids 542 to 561 (20 residues), see Phobius details amino acids 884 to 901 (18 residues), see Phobius details amino acids 908 to 928 (21 residues), see Phobius details amino acids 934 to 958 (25 residues), see Phobius details amino acids 984 to 1005 (22 residues), see Phobius details amino acids 1012 to 1034 (23 residues), see Phobius details TIGR00914: heavy metal efflux pump, CzcA family" amino acids 1 to 1046 (1046 residues), 892.5 bits, see alignment E=1.9e-272 PF00873: ACR_tran" amino acids 6 to 1038 (1033 residues), 803.5 bits, see alignment E=1.4e-245

Best Hits

KEGG orthology group: None (inferred from 97% identity to rsl:RPSI07_mp0035)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1052 amino acids)

>RALBFv3_RS23130 CusA/CzcA family heavy metal efflux RND transporter (Ralstonia solanacearum IBSBF1503)
MLRAILRLSLLRRPLILLFLLVFVLAGLFAYSRLNIEAYPNPAPVILEITAQTPGLSAEE
MERYYTVPMEIGLAATPGVESIRSTSFYGLSFVRVTFRYGIDYYFAYTQAALSLQQNVSL
PNSVQPQIQASSLVGEVVRYQLKGPPHFGLTNLRTLQDWVLQRRLKTVPGVAQVVSWGGT
TKEYDVEVDPKKLEAYGVTLPQMMTALGNANINVGGRTINFGQQSVNIRGVGLIQDVRDI
DKIVLTQSNGVPVQVKDVARTRIGFTPRLGRAGRDNDDDVVTAIVVMNRTMQTNDVVARV
KAELDKINADGSLPPGVKIERYYDRSELVSVTTHTVMHALLFGCLLVFFIQWVFLGDLRS
AIIVSVNIPFALFFSILLLLLTGESANLLSVGAVDFGIIVDSSVILVENVFRNFQMPAAE
QARLLMSRDAKVLGLRVPERLRMIFVSALQVDRAVFFSALITVAAFVPLFTMQGVEGQIF
GPMARTYGYALAGALIATFTVTPALCSYLLPRHIEEKETWLVRALHRLYAPALGWSLSNR
RIAVAIGALVLVATGLLMPFLGTEFLPALEEGNLWIRLTMPQTSSLESGVVPVSRMRQIL
LKHPEVRTVVSQHGRPDDGSDSAGFYNAEFFVPLKPYDQWPAGMTKEKLIAQVQQEFTSE
FTGVGLNFSQYIQDNVEEGLSGVKGANAVKIVGPDLSVLERLADQVRAEMSQVKGVTDLG
VFRVLGQPNLNVRINREAAARYGLNTGDVNTVVQAALGGSQATTILEGDRQFGLTVRLAP
EYRNNIEAVRNLRVAYQNANGGNSYIPLSALADISLETGASYIYHEKNIRYIPVKFSVRG
RDLGGTVAEAQDRIARNVKLPQGYRIEWAGEFEELEQAKQRLEVVVPISILLILVLLYGL
FNSMRDSLMALAGIPFAITGGVAALFLTGLDFSISAAIGFVSLFGVSVMDGILMITYYND
LRRERGFKPTEAMFHAAQQRMRPMLMTALSACIGLFPAAVSTGIGSQVQRPLATVVVGGM
LVGPLMLLVIVPALRMVFLGKEPQEDEPAPAA