Protein Info for RALBFv3_RS05120 in Ralstonia solanacearum IBSBF1503

Annotation: tRNA epoxyqueuosine(34) reductase QueG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 386 TIGR00276: epoxyqueuosine reductase" amino acids 31 to 383 (353 residues), 440.8 bits, see alignment E=1.5e-136 PF08331: QueG_DUF1730" amino acids 79 to 168 (90 residues), 64.6 bits, see alignment E=9.5e-22 PF13484: Fer4_16" amino acids 220 to 284 (65 residues), 87 bits, see alignment E=1.8e-28

Best Hits

Swiss-Prot: 65% identical to QUEG_ALIDK: Epoxyqueuosine reductase (queG) from Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)

KEGG orthology group: None (inferred from 99% identity to rsc:RCFBP_10856)

Predicted SEED Role

"Iron-sulfur cluster-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (386 amino acids)

>RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG (Ralstonia solanacearum IBSBF1503)
MSGTPTSLPELGLDARLPADEAGMAALVAQIRSWGTGLGFDAIRIADVDLSHAEDGLRTW
LAQGFHGDMDYMANHGMLRARPAELVAGTVRAIVARMLYVPHRGAAAPPGGDWRAIEWDR
LRRPEDATISLYARGRDYHKVLRQRLQKLAEHIASAVGPYGYRVFTDSAPVLEVALATNG
GLGWRGKHTLLLDRDAGSMFFLGEILIDLPLPVDPPATPRCGHCTRCIDVCPTQAIVAPY
VVDARRCISYLTIEHKGAIPVELREAMGNHVYGCDDCQLVCPWNKFAVHAGLPDFDVRNG
FDAVTLVDLFGWTEDEFNQRLEGSPIRRIGHERWLRNIAVALGNALRAPLPASSRARLLA
ALQARADDPSPLVREHVAWALAQVQH