Protein Info for RALBFv3_RS02310 in Ralstonia solanacearum IBSBF1503

Annotation: DUF4743 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 267 PF15916: DUF4743" amino acids 7 to 111 (105 residues), 100.1 bits, see alignment E=8.8e-33 PF00293: NUDIX" amino acids 121 to 223 (103 residues), 32.6 bits, see alignment E=7.4e-12

Best Hits

KEGG orthology group: None (inferred from 98% identity to rsc:RCFBP_11458)

Predicted SEED Role

"NUDIX hydrolase, associated with Thiamin pyrophosphokinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (267 amino acids)

>RALBFv3_RS02310 DUF4743 domain-containing protein (Ralstonia solanacearum IBSBF1503)
MGLAARNRFDAGVLRPWIVSGQAVGWLDHERAALLARWPQWFEVGAGQVDLRDTLDTAAA
RTAALAEVIARLADDGHIRGWRDERFTVDTGWGTPPLALIERAAARFFGIRTYAAHMNGI
IDAPEATLWLARRAESKPIDPGMWDNLVAGGIGHGFDARSALQKECWEEAGIDAGLAAGL
VERGTLDVLRAAPEGIQNETLFVFDLTLPVGFLPVNQDGEVAGHLRASVDTALDIMADCA
MTVDATLVTLDALQRLVPQRFAPDNNR