Protein Info for Psyr_2731 in Pseudomonas syringae pv. syringae B728a

Annotation: General substrate transporter:Major facilitator superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 406 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details transmembrane" amino acids 49 to 69 (21 residues), see Phobius details amino acids 77 to 95 (19 residues), see Phobius details amino acids 101 to 123 (23 residues), see Phobius details amino acids 134 to 157 (24 residues), see Phobius details amino acids 163 to 183 (21 residues), see Phobius details amino acids 216 to 236 (21 residues), see Phobius details amino acids 253 to 272 (20 residues), see Phobius details amino acids 280 to 300 (21 residues), see Phobius details amino acids 306 to 326 (21 residues), see Phobius details amino acids 338 to 357 (20 residues), see Phobius details amino acids 368 to 389 (22 residues), see Phobius details PF07690: MFS_1" amino acids 16 to 354 (339 residues), 150.5 bits, see alignment E=9e-48 amino acids 218 to 398 (181 residues), 42.9 bits, see alignment E=4.7e-15 PF06779: MFS_4" amino acids 36 to 384 (349 residues), 29 bits, see alignment E=1.1e-10 PF00083: Sugar_tr" amino acids 45 to 191 (147 residues), 54.3 bits, see alignment E=1.7e-18

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_2731)

Predicted SEED Role

"Putative hydroxycinnamate transporter" in subsystem Phenylpropanoid compound degradation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZSV2 at UniProt or InterPro

Protein Sequence (406 amino acids)

>Psyr_2731 General substrate transporter:Major facilitator superfamily (Pseudomonas syringae pv. syringae B728a)
MNSPLRRSTLTIVLCFIVALIEGFDLQAAGTAAAGLRQTFALDPKMMGWVFSAGIIGLLP
GAFFGGWIADRIGRKRILVSAVLLFGVFSLSTAYVESFSGLLLVRFMTGLGLGAALPNLI
ALCAEAVSERHRGLAISVMYAGVPLGGALAAVVAMFTSEHWQTTFIIGGLVPLLVAPLMI
LLLPESSAFKQQTTADSVRYSSATALFGEGRARTTLALWLGYFFTLTVMYMLLNWLPSLL
IGQGFSKPQAGMVQMLFNIGGALGSLLGGLLLDRCNGIKVVLFVYAGLLAALAGVGLSVG
IVPMAVAGFAAGVFVIAAQLVLYALAPPSYPTSVRATGVGAAVAIGRLGSVAGPLAAGQL
LGAGAGTAGVLLATSPGLVIAALAAITVLSRSVAIEKRELKAAESS