Protein Info for Psyr_2644 in Pseudomonas syringae pv. syringae B728a

Annotation: Uncharacterized protein conserved in bacteria-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 643 PF13166: AAA_13" amino acids 2 to 629 (628 residues), 329.7 bits, see alignment E=2.6e-102

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_2644)

Predicted SEED Role

"ATPase involved in DNA repair"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZT39 at UniProt or InterPro

Protein Sequence (643 amino acids)

>Psyr_2644 Uncharacterized protein conserved in bacteria-like protein (Pseudomonas syringae pv. syringae B728a)
MEKNFHEEASQPGVFTLNEGNIEAEKAIADAEAAINLLTGTLDAHMMAGKEAKAAQELAK
DKLKDSIWKHKTPFDNSPLAYCFNRLNTKERVLEAVAQVALAPTTDTPDALRAEAAALHG
ASDAVLPAIPSIKFTGGEIEADLILVEVISGSGDSYLSALIQEFGNSDWVKHALKFESHA
KDQCPLCQQSLPQDFYGEVRKVFDVTYEKRLAALNALQQRYQGAVEQLLRQCNGPTYEIE
AIQIHAVNLRALLQRNLQILATKVSNPTTAVSLDSSAALLKSLNDSIAVEQHKIDEFNAK
VKNKQTHLDSIKDRFWVWLKNACEPQLAAFETEDQQLSKKRQQAKDGVVQMRAEIAVQRN
LIAASRAATTNVDQSVESINQWLKILGLKGFELVKEEGAVPRYRLQREAVNDGVFRTLSE
GEKTLISFLYFLEVCNGELNAQGGTLKGERIIVIDDPISSLSHNYVYDIASLIRRLVLHP
RTRFKQVVILTHNLFFFHEMHKLLKEDKEDSLALFRICKAHYSTVVPMGENEIQNDYQAC
WHTLKDALNGSASASVIPNVMRNILEHYFTFVHQKESLRRALMELSDENPQFRALYRYVN
RESHADSINLTDFGEIDPHAFIQRFREVFVKTNFEAHFDKMMA