Protein Info for Psyr_0809 in Pseudomonas syringae pv. syringae B728a

Annotation: stress protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 389 PF02342: TerD" amino acids 27 to 162 (136 residues), 96 bits, see alignment E=9.8e-32

Best Hits

Swiss-Prot: 50% identical to TERA_ALCSP: Tellurium resistance protein TerA (terA) from Alcaligenes sp.

KEGG orthology group: K05792, tellurite resistance protein TerA (inferred from 100% identity to psb:Psyr_0809)

Predicted SEED Role

"Tellurium resistance protein TerA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZYA5 at UniProt or InterPro

Protein Sequence (389 amino acids)

>Psyr_0809 stress protein (Pseudomonas syringae pv. syringae B728a)
MTQLVPGANAPVAAGPLTVEIIYSPLADADIDVSAFLLTSSGKVRGDQDMCFYGQKSVNG
GALQQTEASAGRAVFSLDPSRLDSVIEKVALTATIYENKASFGSVSRLALSITGGIEADI
PTSGMKETALILGEFYLRQGAWKFRCVAQGFAGGLEPLAKNFGVEVAAPQDQPAPAPVPA
PAPKSTVSLSKITLDKTRASISLEKSSAGFGEIRVNLNWNRRNDSKGGGFFSMKKSNAID
LDVGCLFEMQDGLKGAVQALGNSFGSLNTEPFIKLMGDDRTGSISDGEWLHINGAHWSKI
RRILVYAFIYEGAPNWKETDGVVTIHAPGQPPIEVRLNEEGGRQGMCAIALLENDNGAVK
VTRRVDFHNGHSNMDKAYGWGMRWAAGSK