Protein Info for Psyr_0808 in Pseudomonas syringae pv. syringae B728a

Annotation: stress protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 197 PF02342: TerD" amino acids 1 to 182 (182 residues), 159.6 bits, see alignment E=3.2e-51

Best Hits

Swiss-Prot: 52% identical to TERZ_SERMA: Tellurium resistance protein TerZ (terZ) from Serratia marcescens

KEGG orthology group: K05791, tellurium resistance protein TerZ (inferred from 100% identity to psb:Psyr_0808)

Predicted SEED Role

"Tellurium resistance protein TerD"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZYA6 at UniProt or InterPro

Protein Sequence (197 amino acids)

>Psyr_0808 stress protein (Pseudomonas syringae pv. syringae B728a)
MALTLAKNQTISLEKTAGTGLKKVSMGLGWDPEKASGFFGKLLGGGGGDIDLDASCIMLD
AAKGRLDLVWFRQLQSLDGAIQHSGDNRTGEGAGDDETISVDLEKLPANVKYLVFTVNSF
TGQNFEKVANAYCRIVDLGGRNELGRFDLSEKGQHTGVVMSYLTRTPSGWDFTAVGQVTN
GRTADDLVELAIGAIRV