Protein Info for Pf6N2E2_969 in Pseudomonas fluorescens FW300-N2E2

Annotation: Putative uncharacterized protein STY4534 (Putative uncharacterized protein)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 193 PF12101: DUF3577" amino acids 9 to 137 (129 residues), 172.7 bits, see alignment E=1.6e-55

Best Hits

KEGG orthology group: None (inferred from 88% identity to pfs:PFLU1970)

Predicted SEED Role

"Putative uncharacterized protein STY4534 (Putative uncharacterized protein)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZSS1 at UniProt or InterPro

Protein Sequence (193 amino acids)

>Pf6N2E2_969 Putative uncharacterized protein STY4534 (Putative uncharacterized protein) (Pseudomonas fluorescens FW300-N2E2)
MAHANQSQEATTYFNLHTVGIGYLNRVREVQVRRGQPFVACDIAALHGATDAVEYTRFDC
KVAGGEAERLIRLYMDAVKADKKVLLSFRIGDLWIDPFLYEKGDKQGQPGASLKGRLLYI
DWIKVNGTFEYKAPARQEATAPAEQTPNSEPSPKSTDADAEDTAPPAKSRIEPESAPTSR
TARRVATRTVQSA