Protein Info for Pf6N2E2_834 in Pseudomonas fluorescens FW300-N2E2

Annotation: Cation efflux system protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1026 signal peptide" amino acids 1 to 38 (38 residues), see Phobius details transmembrane" amino acids 336 to 354 (19 residues), see Phobius details amino acids 361 to 381 (21 residues), see Phobius details amino acids 388 to 412 (25 residues), see Phobius details amino acids 428 to 451 (24 residues), see Phobius details amino acids 464 to 486 (23 residues), see Phobius details amino acids 525 to 545 (21 residues), see Phobius details amino acids 858 to 876 (19 residues), see Phobius details amino acids 883 to 905 (23 residues), see Phobius details amino acids 911 to 932 (22 residues), see Phobius details amino acids 960 to 979 (20 residues), see Phobius details amino acids 985 to 1009 (25 residues), see Phobius details PF00873: ACR_tran" amino acids 6 to 1007 (1002 residues), 498.7 bits, see alignment E=3.2e-153 PF03176: MMPL" amino acids 851 to 1008 (158 residues), 23.8 bits, see alignment E=2e-09

Best Hits

KEGG orthology group: None (inferred from 85% identity to ent:Ent638_1874)

Predicted SEED Role

"Cation efflux system protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZVY4 at UniProt or InterPro

Protein Sequence (1026 amino acids)

>Pf6N2E2_834 Cation efflux system protein (Pseudomonas fluorescens FW300-N2E2)
MSFNLSALAVRERAITVFLIFLIAVAGTLAFFKLGRAEDPPFTVKQLTVITAWPGATARE
MQDQVAEPLEKRLQELKWYDRSETYTRPGLAFTMVSLLDRTPPSQVQEEFYQARKKLDDE
ATKLPAGVIGPLVNDEYSDVTFALFALKAKGEPQRLLVRDAEVLRQRLLHVAGVKKVNII
GEQAERIFISFSHDRLATLGVSPQDIFAALNSQNVLTPAGSIETKGPQVFLRVEGAFDTL
EKIRDTPLTIQGRTLKLSDVATVERGYEDPATFLVRNNGEEALLLGVIMREGWNGLDLGK
ALDAETSKINEDMPLGMTLTKVTDQAVNIDSAVGEFMVKFFVALLVVMLVCFLSMGWRVG
VVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYD
RIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAV
AFTPYLGMKMLPDIKPVEGGHAAIYNTRHYNRFRQVLARVISHKWLVAGTVITLFVVAVL
GMGLVKKQFFPTSDRPEVMVEVQMPYGTSIEQTSAATAKVEAWLQKQAEAKIVTAYIGQG
APRFFLAMAPELPDPSFAKIVVLTDSQEARETLKFRLREAVAAGLAPEARVRATQIVFGP
YSPFPVAYRVMGPDPTKLREIAARVQDVMQASPMMRTVNTDWGPLVPTLHFNLDQDRLQA
VGLTSSAVAEQLQFLLAGVPITAVREDIRSVQVVGRAAGDIRLDPARIEGFTLVGAAGQR
IPLSQVGEVDVRMEDPILRRRDRTPTITVRGDIAEGLQPPDVSSAMLVLLQPILDTLPDG
YRIQQAGAIEESGKANQAILPLLPIMVALTLLIIIVQVRSISAMLMVFLTAPLGLIGVVP
MLLIFQQPFGINALVGLIALSGILMRNTLILIGQIHHNAQEGLDPFNAVIEATVQRARPV
LLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTLMTLVFLPAMYSIWFKIRPVQPAPM
ETVRLV