Protein Info for Pf6N2E2_6053 in Pseudomonas fluorescens FW300-N2E2

Annotation: Hydantoin permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 509 transmembrane" amino acids 71 to 99 (29 residues), see Phobius details amino acids 131 to 159 (29 residues), see Phobius details amino acids 172 to 195 (24 residues), see Phobius details amino acids 206 to 224 (19 residues), see Phobius details amino acids 244 to 266 (23 residues), see Phobius details amino acids 283 to 306 (24 residues), see Phobius details amino acids 326 to 355 (30 residues), see Phobius details amino acids 367 to 385 (19 residues), see Phobius details amino acids 391 to 415 (25 residues), see Phobius details amino acids 445 to 465 (21 residues), see Phobius details amino acids 471 to 488 (18 residues), see Phobius details PF02133: Transp_cyt_pur" amino acids 43 to 476 (434 residues), 274.6 bits, see alignment E=7.3e-86

Best Hits

KEGG orthology group: None (inferred from 98% identity to pba:PSEBR_a3966)

Predicted SEED Role

"Hydantoin permease" in subsystem Hydantoin metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A161GUB5 at UniProt or InterPro

Protein Sequence (509 amino acids)

>Pf6N2E2_6053 Hydantoin permease (Pseudomonas fluorescens FW300-N2E2)
MRTSLSNNIALDLPSATTALDDTTATSLALSPRLHNKDLAPTKAEGRRWGRYSIFALWTN
DVHNIANYSFAIGLYALGLGGWQILLSLGIGAALVYGFMNLSGYMGQKTGVPFPVISRIS
FGIHGAQIPALIRAVIAIAWFGIQTYLASVVFRVLLVAIHPGFADYDRDSILGLSSLGWV
CFVAIWFVQLVILAYGMETVRRYEGFAGPVILVTVAALAGWMYTQAGATIAWSIREPLAG
GEMWRNIFAGGALWLSIYGTLILNFCDFARSSPCRRTIIVGNFWGLPVNILVFAGITILL
CGAQFQINGQIIESPTQVIASIPNTFFLVLGCLAFLIVTVAVNIMANFVAPAFVLSNLAP
KYLTFRRAGLISAAIAVLILPWNLYNSPLVIVYFLSGLGALLGPLYGVIMVDYWLLRKGR
INVPQLYSEDPNGAYFYSNGVNLRAVAAFIPAALIAIILALVPGFDSVSPFSWLIGASIA
GLLYLIIAKRQPNYEDVSGESIAVDNVHH