Protein Info for Pf6N2E2_4244 in Pseudomonas fluorescens FW300-N2E2

Annotation: Glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 547 PF13692: Glyco_trans_1_4" amino acids 323 to 454 (132 residues), 37.7 bits, see alignment E=2.5e-13 PF00534: Glycos_transf_1" amino acids 388 to 455 (68 residues), 32.4 bits, see alignment E=6.5e-12

Best Hits

KEGG orthology group: None (inferred from 98% identity to pba:PSEBR_a5627)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160A3I0 at UniProt or InterPro

Protein Sequence (547 amino acids)

>Pf6N2E2_4244 Glycosyltransferase (Pseudomonas fluorescens FW300-N2E2)
MNFILYSDVNDHSISQSLGRPEYSYYFVLKAYRPVLESLGPVHVVSSVAEVDPLYQTLQA
AGQDCLFLSFSPPHKTPLDLLCPMVCVVAWEFDSIPAEHWDDDLRHDWSRTLARHGRVIT
LSSHTAEAIRRTLGEDFPVLVLPTPLWERFAAVREQHPSLPVNPGTTLQIKGCIIDSRPL
GLSADGLIAPIIEEAPEPEPEPEPIIESVIEPTPLTWRRRAFISRHYLREMIRAFTGKTE
QGPVWLFKHNLLCWYREAVRDLIPVPMRVAVSRILRGPTPPPVIVEAVPEPVLAPIPEPA
PPEHPQAVLPDTSQMVETDVSGVVYVSVFNPDDGRKNWHHLITAFCWALRDVEDATLVLK
MTQNDLSTYYVELLTLLSQLSPFSCRVVVMHGYLEDEQFARLYGAASFYVNASRCEGLCL
PLMEFMSCARPVIAPDHTAMRDYIDAEVAFIVKSSREPTIWPEDSRILYRTLRHRPDWGS
LKLAYQQSYAMAKHQPQAYQAMAVAANERMRRYCAFTPVQQRLADFLAVPGCDEGLPLVL
QAGTASC