Protein Info for Pf6N2E2_3804 in Pseudomonas fluorescens FW300-N2E2

Annotation: Cytosine/purine/uracil/thiamine/allantoin permease family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 488 transmembrane" amino acids 35 to 56 (22 residues), see Phobius details amino acids 62 to 82 (21 residues), see Phobius details amino acids 101 to 123 (23 residues), see Phobius details amino acids 141 to 161 (21 residues), see Phobius details amino acids 165 to 186 (22 residues), see Phobius details amino acids 198 to 221 (24 residues), see Phobius details amino acids 238 to 262 (25 residues), see Phobius details amino acids 273 to 294 (22 residues), see Phobius details amino acids 302 to 319 (18 residues), see Phobius details amino acids 331 to 352 (22 residues), see Phobius details amino acids 359 to 380 (22 residues), see Phobius details amino acids 401 to 421 (21 residues), see Phobius details amino acids 431 to 454 (24 residues), see Phobius details PF02133: Transp_cyt_pur" amino acids 21 to 443 (423 residues), 177.4 bits, see alignment E=2.4e-56

Best Hits

KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a379)

Predicted SEED Role

"Cytosine/purine/uracil/thiamine/allantoin permease family protein" in subsystem Purine Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A161H8N8 at UniProt or InterPro

Protein Sequence (488 amino acids)

>Pf6N2E2_3804 Cytosine/purine/uracil/thiamine/allantoin permease family protein (Pseudomonas fluorescens FW300-N2E2)
MAVSSTRASSKPLIEKRSIDYIPEAERHGRLLSQFTLWMGANLQITAIVTGALAVVLGGD
VFWSLIGLLIGQVLGGGVMALHAAQGPKLGLPQMISSRVQFGVYGVAIPIVLVCLMYLGF
TATGTVLSGQALGQLFDVSDSVGILIFASVIVLVTVLGYRVIHFIGRVASILGVIAFVYL
FARLISQTDVGALLQIRHFSWSSFLLAVSLAASWQIAFGPYVADYSRYLPSQTSSVKTFF
AAGAGSVIGAQVAMILGVFAAASANGQFAGHEVAYIVGLGGAGATAALLYFSIAFGKVTI
STLNSYGSFMCIATIISGFRGHLNVTRLQRLVFVLVIVGAATLIALLGQHSFLGAFKSFI
LFLLAFFTPWSAINLVDYYCITRERYDVPALADPNGRYGRWNALGISVYVFGVLVQLPFI
ATKFYTGPLVGAMGGVDISWIIGLVVPAGLYYVAAKKWHSAVPDQLILPLEQDAVDAQPS
RAGRIQAV