Protein Info for Pf6N2E2_3513 in Pseudomonas fluorescens FW300-N2E2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1322 transmembrane" amino acids 761 to 780 (20 residues), see Phobius details amino acids 889 to 914 (26 residues), see Phobius details amino acids 934 to 956 (23 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 70% identity to pba:PSEBR_a632)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A160A1T5 at UniProt or InterPro

Protein Sequence (1322 amino acids)

>Pf6N2E2_3513 hypothetical protein (Pseudomonas fluorescens FW300-N2E2)
MDITAERQSNMARTGSVSSPQAATVQMTLERLTRWQVAIDARLQTQMSLLEVLEEYLLVE
LRTHYHQGNIDPHFIDTLLDTVLQRMIDQKPLVSDEEQDAPYRWPDGADLGFPTERQAVI
VQAVESVASGFIYHYKDYLRRHWRMAERDASLEALLGHKLDEHMAAVELLFQPGPLEDQG
GDELREKIEALQHRWRQMSQLTALATTQERQDLEAIARLQLPDWLRGLGEVDRKKLKAFQ
DQTTQAQALLDGLLDGLASLQAFARHLAKDYVRRERDMEVEPDSIRVQLQWRSVMGQPVQ
TRSLSELLAAGPVRQDAVSVFLVENGAMLRNQPLSPAFISQMLAELDAPAGYRQALVERY
GRGDLKDAMLDWFTARLQQSAFIARCAGHLTVANHEAVKALWEGEASAPSVGVLRVSCLV
LPNALKCADFLLFYRQDLQGDLLLYAPDKPDGQEWIELPSLWAVSVEIGAWTRSEAGREY
LLQRISPADRSVAREYFARVADKPATWDSSQDPRGAVAGFRACLEDIVAVGLDNNLTQVE
LDEAPRWYAALPLDARRNISTLSQELMVHQQVFNQQLVGYEVFVDFAKRIVTQAIAPYMR
SKGVQAPVDPATVLIDYNPGLADGKTKVASLLELAIHGYDDNSGIDNPRKGVRSSVGQDL
GQVRSAELASYIRRAYLGEQYARQVRGRFLDARAPEYAQRRNTYRNLLLTRMDRDLRVAT
GKSQLGASEFWWLTRQVTLLGESVSVSGPVYSGSVVQREGVIRFSIGGHIVMGAYVFAYF
DPKGAYWLYTPDAPDGVTFRRYQDFSGAVATRLHDYVLERVALGARAAVRRSLVALAATS
IGVDTLREFNRVNDIQAEFDAYIERAISDVEDVTKSRAEVIRRQVIKGLLFASAPVCLVY
PPFALLLDVAFIAVSVKQAAEAHGQGDTDRALGHWLMASWGLLFAALGGGTLAPLLGRAA
RSLKLVVKPVSLSEQRLRRVTPLIAKETGPVIQPIRFKPKQAVGKAPENLELVTGESIFQ
GTYRSPSSASQPHTTYYIRSKGKYYQVKEDPHFGGLCLVDASRPGALYKLPIRRVGKGKW
VHNEVGLRGGNDQVRVLGRVSDLREAFPGHVFPDVSRGALQGEAVVARFSEAAADNYLFS
MNAQACVIASLYNPTTKVGAVIHFDHNIRALIERSLRDVTRRLGGPAKDIRVTLVGGDWL
TGSDIGGPVRSVMRRQGMRPTWDHWSYSSCFGNIFGVALDIRSGVTSVFKTSRSQVERYY
IPVLARAKQGSDPVSVRARGFMTRLKSEMLVANAYGTVLTPQGRPATAAQIEAHAFPTVA
LS