Protein Info for Pf6N2E2_3218 in Pseudomonas fluorescens FW300-N2E2
Annotation: Large exoproteins involved in heme utilization or adhesion
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Large exoproteins involved in heme utilization or adhesion"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A159ZZ12 at UniProt or InterPro
Protein Sequence (2542 amino acids)
>Pf6N2E2_3218 Large exoproteins involved in heme utilization or adhesion (Pseudomonas fluorescens FW300-N2E2) MGAWQVASELVKSHGKDKSRTSLSLVIGVGGSVFASVAAAGALPSGGNIVAGNGSIHQNG NNMAIHQGSDKLAIDWQSFSIGKGNTVQFVQPGAASVALNRVLGSDVSVIQGALKANGQV FLVNPNGVLFTPSAQVDVGGLVASTLSMTTEDFLAGNYRFSGTSAASVVNQGNINAAQGG TIALIAAKIVNEGSITANKGNVLLGAGSVVTLDLGGPVQLEVKEGALQALIENGGAIRAD AGRILLTARAAETLASTVINNTGLIEARSLDIGENGVVTLMGDQGGVQVAGRIDVSSETG KGGKIVVTGEHVAINGGAELDATGAKGGGDIYVGGSWQGKDPAIKQASQTTIAAGAVLDA SATDNGKGGTVVAWSDTKKPGSVTRVDGTLKATGGAKGGDGGKIETSGAKLAVSKAADAS AKNGKGGLWLLDPDSVTVGPGNGGLTGGANGQAATVGFDAIDTALAGGTDVAIKADNTIH WNGDYTPQSVSGDRTLTLQSGHDDGATGRYVFGNIFLNGDIDASGAGNGNSLALILNGKI ALNTDVSLKSNGGNVVFAGVVDSDAVANNRQLRVDAGSGSIIFSDMVGGNSALGALYATT SGTGKTFINGAKVFTRGEQVYTGAVELGTSQFLNADFENGLVGWKTSIDQFFTGVTVVDG VVSPNDPTLPTTSPTNGNAPSVSPGDQGDMNYKPLTPVAAVGQGEDGGAALLLGTENTSN CLNAPAGCIMRGPSVVSEGTVSLAAGEKVSFDYKPVAGGDTYDVFGYLLNVNTGEYQIIL NETGNGTGAVNWQSHTATADKAGTYKFVFVSGSFDQTAGKQVGGSLYVDNIKTDTSGSKG LQGSSITFNGSLNSTDNNLAIKADDINFNGGVGSVTGNGNITLETNTPSKDIAVGGSTGD APGSLELTGTDIGALGDGFTSVNIGGADMTGDINIIEATRINDNLVLNAGTGNIHINDQL TVADAPGTGNDDTKPAPVLVLQSNGGKVDQTAGGALVADGLVLLGDGATHDLDNAANDVN TISSDTGTVSFADVDDLTVGVVTIPDSQTPTNPQGVPVAGMTQTGDLNLVADKLTVGQAL LTQGDTSLTADEIDLAASVSGSGSLTLQQKTDGLDIHLGGSDDPEVTGPNDPLVLSDADL ANIQDGFDKVVIGNDKTRNITVDDEGATFKDDLALVANGVLDLLGDLMLKDPEGTDEDGT TGKGLTLSVDAGKGATQGTGATITADELALRGEGDFQLGKGGHDVGVIAADVGSLAFAGN GNLTVGTVDGTVGITSDEAVTLKTDHDLTLVKGITIENGPRDDASQGQTRADDIITLEVA GNTTQSGDAGAKLDASGLVLLGGNYALGNTGNVIGDIASAAGKVQFNNSADLKVGSLTAT HADGTQTTITGVNNTGDVSIGTQGNLAINEGLATSGNVFLNVDGKTTQDGNGNITADGLA LNGGDFELRNNGNVVGDIASEAGKVAFNNTGNLKVGTLTETDGNGNVVKVTTGVNNTGDV SIGTQGDLAINEGLATSGNVFLNVDGKTTQDGNGNITADGLALNGGDFELRNNGNVVGDI ASEAGKVAFNNTGNLKVGTLTETDGNGNVVKVTTGVNNTGDVSIGTQGDLAINEGLATSG NVFLNVDGKTTQDGNGNITADGLALNGGDFELRNNGNVVGDIASEAGKVAFNNTGNLKVG TLTETDGSGNVVKVTTGVNNTGDVSIGTQGDLAINEGLATSGNVFLNVDGKTTQDGNGNI TADGLALNGGDFELRNNGNVVGDIASEAGKVAFNNTGNLKVGTLTETDGSGNVVKVTTGV NNTGDVSIGTQGDLAINEGLATSGNVFLNVDGKTTQDANGNITADGLALNGGDFELRNRG NVVGDIASEAGKVAFNNTGNLKVGTLTETDGNGNVVKVTTGVNNTGDVSIGTQGDLAINE GLATSGNVFLNVDGKTTQDGNGNITADGLALNGGDFELRNRGNVVGDIASEAGKVAFNNT GNLKVGTLTETDGNGNVIKVTTGVNNTGDVSIGTQGDLAINEGLATSGNVFLNVDGKTTQ DGNGNITADGLALNGGDFELRNNGNVVGDIASDAGKVAFNNTGNLKVGTLTETDGNGNVV KVTTGVNNTGDVSIGTQGDLAINEALATSGNVFLNISGKTTQDANGNITADGLALKGGNF DLRNASNWVGDIASRAKDVSFVNRADVTVGRLTETALDGTRLDQIVGIGNTGKVQVVTTT GNITLAENVSTTSNAADAIVLNAGQSASAGVAAGGDVKADAGVTVSTGAGGRAVIYTGSL AGSTGVVDVVGSGSGNFRYNSDEQQSNFGRALGNTGVHAVYREQPVLVVSTNGATTQTKV FDGQTTFNGGGIAGYDANGLWNGDTKPMLGNPLYSVGTQGPGSHLINIGGLADLGYLIVS SPANANLTVTPSIDYDAVRQSVADATRVGAEVSSPHAPELNPSQAKPVDWSDHGVDDGGL LLVDQGGTRANGNAGDGAGNALAQGDSDSAAQAEDTASERELAGNVCADGGVSEGGACAA YPPQTVFVVRGGVRLPGLAMRP