Protein Info for Pf6N2E2_1918 in Pseudomonas fluorescens FW300-N2E2

Annotation: Major facilitator family transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 386 signal peptide" amino acids 1 to 36 (36 residues), see Phobius details transmembrane" amino acids 46 to 69 (24 residues), see Phobius details amino acids 78 to 101 (24 residues), see Phobius details amino acids 107 to 125 (19 residues), see Phobius details amino acids 137 to 158 (22 residues), see Phobius details amino acids 166 to 187 (22 residues), see Phobius details amino acids 208 to 227 (20 residues), see Phobius details amino acids 244 to 264 (21 residues), see Phobius details amino acids 271 to 289 (19 residues), see Phobius details amino acids 295 to 314 (20 residues), see Phobius details amino acids 326 to 348 (23 residues), see Phobius details amino acids 353 to 377 (25 residues), see Phobius details PF07690: MFS_1" amino acids 17 to 344 (328 residues), 142.3 bits, see alignment E=9.2e-46

Best Hits

KEGG orthology group: None (inferred from 99% identity to pba:PSEBR_a2064)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9X6G2 at UniProt or InterPro

Protein Sequence (386 amino acids)

>Pf6N2E2_1918 Major facilitator family transporter (Pseudomonas fluorescens FW300-N2E2)
MSANNGRLPMIGLLALSTTAFLTILTETMPAAVLPAMSESLEQPPAGIGLLVSIYALASA
AAAIPIVALTRSLPRKSLYIMLVLSFAMANGITAISTSYALTVASRVVAGLAAGVVWPVI
CGYAIRLVDRKDMGRAVAITLAGSTVAMVAGLPLGSMLGSLLGWRFSYGLLSLLALLVIV
WVLLVVPPMPGEGRKEGTSIHDVIRTPGLRVILLSAFCAILAHYTLYTYMAPLAEKNRLS
GGTAQGLFLFGTGAILGVLIAGRFVDTRLRLIATTALTCTAVTMVVLIAAPYQMIASAAI
FVWGASFGGMPTVFQSATGRVAEDNAEVATAILTTIYNLGIFGGGAVGGLLLSYFGIVSL
SGFALLIVSASLVVVMGGRCHAFPRQ