Protein Info for Pf6N2E2_1736 in Pseudomonas fluorescens FW300-N2E2

Annotation: blr1018; hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 416 transmembrane" amino acids 10 to 30 (21 residues), see Phobius details amino acids 45 to 66 (22 residues), see Phobius details amino acids 73 to 94 (22 residues), see Phobius details amino acids 100 to 128 (29 residues), see Phobius details amino acids 140 to 158 (19 residues), see Phobius details amino acids 164 to 187 (24 residues), see Phobius details amino acids 229 to 250 (22 residues), see Phobius details amino acids 261 to 280 (20 residues), see Phobius details amino acids 292 to 310 (19 residues), see Phobius details amino acids 316 to 339 (24 residues), see Phobius details amino acids 351 to 372 (22 residues), see Phobius details amino acids 383 to 403 (21 residues), see Phobius details PF07690: MFS_1" amino acids 15 to 367 (353 residues), 87.4 bits, see alignment E=4.8e-29

Best Hits

KEGG orthology group: None (inferred from 94% identity to pba:PSEBR_a2256)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A159ZW91 at UniProt or InterPro

Protein Sequence (416 amino acids)

>Pf6N2E2_1736 blr1018; hypothetical protein (Pseudomonas fluorescens FW300-N2E2)
MTHTRFFGKTVLACTFILAMIGWGIGFYGPPIYMQVVMERTGWPIAQVSTAVTLHFLSGT
LVIANLPRLYARFGIPFITLLGSVLLGIGVNIWAHANQLWVLYSGALCSGIGWVTLGAAA
VNTLIAPWYVKERPKALGKAYNGASLGGVIFSPLWVLLIERFGFAMAALVISIVAVLLIG
AFAFLVFNKSPQSLGQHPDNADQPEPVPISASATPWTAKQTLSSASFRTLAAGMSLGLFA
QIGLIAHLYSILVGRMGAHEASFAMGLATASAMGGRYVAARLMIQGMNRRQLACLGYAIQ
MLGTLMLLGLDLHPTVAWIAVVLIGSGIGNATSLPPLIAQTEFSREQTAKVIALMVAISQ
ATYAFAPAFFGLVRSAFTDPNHAIVAVVTGAVVVQVLAILSFYRGVSARPFKKTVF